Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 AL079307.3-201ENST00000556114 283 ntBASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 KRT8P12-202ENST00000472924 1397 ntBASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 AC105250.1-201ENST00000509378 2057 ntBASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 AC136621.1-201ENST00000624017 2304 ntBASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 AC004449.1-201ENST00000564240 433 ntBASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 AL589739.1-201ENST00000607720 493 ntBASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 AC073347.1-201ENST00000421633 2643 ntBASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC162PA2VCL2 SSR4P1-203ENST00000599569 2260 ntBASIC15.85■□□□□ 0.13
CCDC162PA2VCL2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC162PA2VCL2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CCDC162PA2VCL2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC162PA2VCL2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
CCDC162PA2VCL2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC162PA2VCL2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC162PA2VCL2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC162PA2VCL2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC162PA2VCL2 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC162PA2VCL2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC162PA2VCL2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC162PA2VCL2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC162PA2VCL2 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CCDC162PA2VCL2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms