Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 AC068587.6-202ENST00000641839 5619 ntBASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 SOCS2P1-201ENST00000417727 557 ntBASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 AL359711.2-201ENST00000563105 872 ntBASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 AC017083.2-201ENST00000608069 979 ntBASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 PCDH8P1-201ENST00000428983 2773 ntBASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 AC124067.4-201ENST00000519691 2379 ntBASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV5A0A0B4J1U4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 AC112492.5-201ENST00000421897 457 ntBASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 TMEM14DP-201ENST00000422205 345 ntBASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 AC006449.5-201ENST00000610658 2098 ntBASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRGV5A0A0B4J1U4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms