Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 HAUS4P1-201ENST00000406739 1145 ntBASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 KRT43P-201ENST00000434019 910 ntBASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 BRI3BPP1-201ENST00000594224 787 ntBASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 BTNL10-201ENST00000595971 695 ntBASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 AC010319.3-201ENST00000597028 470 ntBASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 AC092850.2-201ENST00000623821 2697 ntBASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CSNK1G3Q9Y6M4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 TMEM14DP-201ENST00000422205 345 ntBASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 FAM86LP-201ENST00000478302 853 ntBASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 RPL13AP25-201ENST00000484130 612 ntBASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 ENPP7P5-201ENST00000541031 1031 ntBASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 ME2P1-201ENST00000426028 1970 ntBASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSNK1G3Q9Y6M4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 ACTG1P3-201ENST00000431775 1114 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms