Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 API5-211ENST00000534695 560 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 HILS1-202ENST00000545329 423 ntBASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB1Q9Y5F3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 RPL37AP1-201ENST00000412502 279 ntBASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 GPR53P-205ENST00000457298 1084 ntBASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 AC010336.2-201ENST00000564226 506 ntBASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 AC105021.1-202ENST00000570572 669 ntBASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 AC140912.1-201ENST00000577171 1054 ntBASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 AL589739.1-201ENST00000607720 493 ntBASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 AC004840.1-201ENST00000636359 365 ntBASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 CETN4P-206ENST00000642099 2168 ntBASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 AC087499.5-201ENST00000452760 1342 ntBASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 AL035456.1-201ENST00000456064 1369 ntBASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 PAUPAR-201ENST00000630360 2965 ntBASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB1Q9Y5F3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PCDHB1Q9Y5F3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PCDHB1Q9Y5F3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.13
PCDHB1Q9Y5F3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 GNAQP1-201ENST00000444815 1067 ntBASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHB1Q9Y5F3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms