Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT11Q9UKZ1 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT11Q9UKZ1 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT11Q9UKZ1 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CNOT11Q9UKZ1 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CNOT11Q9UKZ1 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.29■□□□□ 0.04
CNOT11Q9UKZ1 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.29■□□□□ 0.04
CNOT11Q9UKZ1 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT11Q9UKZ1 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT11Q9UKZ1 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT11Q9UKZ1 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT11Q9UKZ1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT11Q9UKZ1 AC090616.6-203ENST00000579186 1945 ntBASIC15.29■□□□□ 0.04
CNOT11Q9UKZ1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CNOT11Q9UKZ1 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT11Q9UKZ1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT11Q9UKZ1 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.29■□□□□ 0.04
CNOT11Q9UKZ1 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CNOT11Q9UKZ1 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 AC005912.2-201ENST00000619492 2400 ntBASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 AC105250.1-201ENST00000509378 2057 ntBASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 AC112693.3-201ENST00000624819 1983 ntBASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 RARRES2P8-201ENST00000566335 367 ntBASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 AC026120.1-201ENST00000611536 926 ntBASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 AL513210.1-201ENST00000629608 234 ntBASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNOT11Q9UKZ1 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 AKAP8P1-201ENST00000434743 1349 ntBASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 TFAMP1-201ENST00000412727 736 ntBASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 CNN2P11-201ENST00000429351 262 ntBASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 AP000344.2-201ENST00000512987 629 ntBASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 KRT8P48-201ENST00000515599 1220 ntBASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 AC021097.1-201ENST00000607902 574 ntBASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms