Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 AC015802.1-201ENST00000588104 1449 ntBASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 AC006455.2-201ENST00000429931 906 ntBASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 MXRA5Y-201ENST00000420610 8000 ntBASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 LPP-AS2-201ENST00000605573 2852 ntBASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 IDO2-204ENST00000502986 2294 ntTSL 5 BASIC7.98□□□□□ -1.13
CDC42SE1Q9NRR8 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 GOLGA2P9-201ENST00000596977 1937 ntBASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 ORAI2-210ENST00000611770 10679 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 HNRNPMP1-201ENST00000560685 1768 ntBASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 AC005906.2-201ENST00000640877 3408 ntTSL 5 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 MIR149-201ENST00000384879 89 ntBASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 DUX4L9-201ENST00000449051 1259 ntBASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 AC069544.1-201ENST00000609399 999 ntBASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 NT5C3AP1-202ENST00000441170 1663 ntBASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CDC42SE1Q9NRR8 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms