Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 TSPY22P-201ENST00000427496 604 ntBASIC18.9■□□□□ 0.62
RTN4Q9NQC3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 AC104076.2-201ENST00000448912 469 ntBASIC18.9■□□□□ 0.62
RTN4Q9NQC3 AC092647.4-201ENST00000457211 535 ntBASIC18.9■□□□□ 0.62
RTN4Q9NQC3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 AC112187.3-201ENST00000607844 408 ntBASIC18.9■□□□□ 0.62
RTN4Q9NQC3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
RTN4Q9NQC3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RTN4Q9NQC3 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
RTN4Q9NQC3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RTN4Q9NQC3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
RTN4Q9NQC3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 OXA1L-213ENST00000612549 2971 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 C2-206ENST00000442278 2434 ntTSL 2 BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 AC006213.4-201ENST00000616184 634 ntBASIC18.89■□□□□ 0.61
RTN4Q9NQC3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.89■□□□□ 0.61
RTN4Q9NQC3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 AP003400.6-201ENST00000624698 740 ntBASIC18.89■□□□□ 0.61
RTN4Q9NQC3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 AC004990.1-202ENST00000454234 1965 ntTSL 2 BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RTN4Q9NQC3 AC009336.1-201ENST00000608941 1553 ntBASIC18.89■□□□□ 0.61
RTN4Q9NQC3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 MBLAC2-202ENST00000514906 1936 ntBASIC18.88■□□□□ 0.61
RTN4Q9NQC3 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 AL645929.1-201ENST00000420084 975 ntBASIC18.88■□□□□ 0.61
RTN4Q9NQC3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 AC063952.2-201ENST00000498792 1227 ntBASIC18.88■□□□□ 0.61
RTN4Q9NQC3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms