Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 MIR3197-201ENST00000582241 73 ntBASIC18.64■□□□□ 0.57
RNF41Q9H4P4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 AC138969.3-201ENST00000546612 1459 ntBASIC18.64■□□□□ 0.57
RNF41Q9H4P4 AC138932.2-201ENST00000548268 1459 ntBASIC18.64■□□□□ 0.57
RNF41Q9H4P4 AC126755.4-201ENST00000549796 1459 ntBASIC18.64■□□□□ 0.57
RNF41Q9H4P4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF41Q9H4P4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 TNRC18P3-201ENST00000441896 2691 ntBASIC18.63■□□□□ 0.57
RNF41Q9H4P4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 AL589987.1-201ENST00000453380 819 ntBASIC18.63■□□□□ 0.57
RNF41Q9H4P4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 AC004790.1-201ENST00000612686 536 ntBASIC18.63■□□□□ 0.57
RNF41Q9H4P4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
RNF41Q9H4P4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 GNAQP1-201ENST00000444815 1067 ntBASIC18.62■□□□□ 0.57
RNF41Q9H4P4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RNF41Q9H4P4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF41Q9H4P4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms