Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PACSIN1Q9BY11 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 MIR940-201ENST00000401276 94 ntBASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 SPDYE11-202ENST00000450699 704 ntBASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 RN7SL589P-201ENST00000481268 310 ntBASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 HNRNPUP1-201ENST00000554987 333 ntBASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 SPDYE9P-201ENST00000570642 692 ntBASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 AC097359.3-201ENST00000603982 1210 ntBASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 AC026120.1-201ENST00000611536 926 ntBASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 SPDYE10P-202ENST00000612005 668 ntBASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 SPDYE8P-202ENST00000612377 668 ntBASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.88■□□□□ 0.29
PACSIN1Q9BY11 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 AP3S2-216ENST00000617003 1561 ntBASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 HLA-H-201ENST00000383620 1096 ntBASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 EEF1DP4-201ENST00000446006 880 ntBASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 TIMM8BP1-201ENST00000452384 211 ntBASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 PHKG1P2-201ENST00000457537 863 ntBASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 FAM86C2P-203ENST00000528684 1004 ntBASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 SLC25A39P2-201ENST00000537614 270 ntBASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PACSIN1Q9BY11 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.86■□□□□ 0.29
PACSIN1Q9BY11 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PACSIN1Q9BY11 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.86■□□□□ 0.29
PACSIN1Q9BY11 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PACSIN1Q9BY11 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PACSIN1Q9BY11 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms