Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV9Q99603 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TRGV9Q99603 FOXO1B-201ENST00000504678 1527 ntBASIC12.4□□□□□ -0.42
TRGV9Q99603 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.4□□□□□ -0.42
TRGV9Q99603 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV9Q99603 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV9Q99603 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.4□□□□□ -0.42
TRGV9Q99603 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV9Q99603 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV9Q99603 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.4□□□□□ -0.42
TRGV9Q99603 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
TRGV9Q99603 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TRGV9Q99603 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.43
TRGV9Q99603 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.4□□□□□ -0.43
TRGV9Q99603 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.4□□□□□ -0.43
TRGV9Q99603 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
TRGV9Q99603 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
TRGV9Q99603 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
TRGV9Q99603 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.4□□□□□ -0.43
TRGV9Q99603 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
TRGV9Q99603 HLA-A-201ENST00000376802 1334 ntBASIC12.39□□□□□ -0.43
TRGV9Q99603 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV9Q99603 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV9Q99603 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.39□□□□□ -0.43
TRGV9Q99603 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.39□□□□□ -0.43
TRGV9Q99603 AL161772.1-201ENST00000610494 4412 ntBASIC12.39□□□□□ -0.43
TRGV9Q99603 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV9Q99603 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
TRGV9Q99603 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.39□□□□□ -0.43
TRGV9Q99603 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV9Q99603 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV9Q99603 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.39□□□□□ -0.43
TRGV9Q99603 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV9Q99603 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.39□□□□□ -0.43
TRGV9Q99603 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
TRGV9Q99603 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV9Q99603 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV9Q99603 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV9Q99603 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TRGV9Q99603 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TRGV9Q99603 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.39□□□□□ -0.43
TRGV9Q99603 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV9Q99603 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.39□□□□□ -0.43
TRGV9Q99603 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV9Q99603 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV9Q99603 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.39□□□□□ -0.43
TRGV9Q99603 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV9Q99603 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.39□□□□□ -0.43
TRGV9Q99603 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.39□□□□□ -0.43
TRGV9Q99603 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.39□□□□□ -0.43
TRGV9Q99603 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.39□□□□□ -0.43
TRGV9Q99603 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.39□□□□□ -0.43
TRGV9Q99603 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.39□□□□□ -0.43
TRGV9Q99603 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.39□□□□□ -0.43
TRGV9Q99603 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.39□□□□□ -0.43
TRGV9Q99603 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.39□□□□□ -0.43
TRGV9Q99603 AC027307.2-201ENST00000591252 911 ntBASIC12.39□□□□□ -0.43
TRGV9Q99603 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.39□□□□□ -0.43
TRGV9Q99603 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV9Q99603 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.39□□□□□ -0.43
TRGV9Q99603 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
TRGV9Q99603 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV9Q99603 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV9Q99603 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV9Q99603 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV9Q99603 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV9Q99603 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.39□□□□□ -0.43
TRGV9Q99603 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
TRGV9Q99603 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRGV9Q99603 AC009090.5-201ENST00000624886 2285 ntBASIC12.39□□□□□ -0.43
TRGV9Q99603 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV9Q99603 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.38□□□□□ -0.43
TRGV9Q99603 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV9Q99603 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV9Q99603 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV9Q99603 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV9Q99603 AP002414.2-201ENST00000591780 3365 ntBASIC12.38□□□□□ -0.43
TRGV9Q99603 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV9Q99603 KRT8P37-201ENST00000451609 1420 ntBASIC12.38□□□□□ -0.43
TRGV9Q99603 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.38□□□□□ -0.43
TRGV9Q99603 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.38□□□□□ -0.43
TRGV9Q99603 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.38□□□□□ -0.43
TRGV9Q99603 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV9Q99603 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV9Q99603 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
TRGV9Q99603 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.38□□□□□ -0.43
TRGV9Q99603 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV9Q99603 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV9Q99603 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV9Q99603 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV9Q99603 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV9Q99603 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV9Q99603 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRGV9Q99603 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.38□□□□□ -0.43
TRGV9Q99603 AC007967.2-201ENST00000432613 625 ntBASIC12.38□□□□□ -0.43
TRGV9Q99603 EEF1DP4-201ENST00000446006 880 ntBASIC12.38□□□□□ -0.43
TRGV9Q99603 AL139010.1-201ENST00000454878 894 ntBASIC12.38□□□□□ -0.43
TRGV9Q99603 PHKG1P2-201ENST00000457537 863 ntBASIC12.38□□□□□ -0.43
TRGV9Q99603 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.38□□□□□ -0.43
TRGV9Q99603 FAM86C2P-203ENST00000528684 1004 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms