Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AL138828.2-201ENST00000615812 383 ntBASIC18.75■□□□□ 0.59
NEK1Q96PY6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEK1Q96PY6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NEK1Q96PY6 FO538757.1-201ENST00000623083 1397 ntBASIC18.75■□□□□ 0.59
NEK1Q96PY6 LINC00554-201ENST00000564841 3011 ntBASIC18.75■□□□□ 0.59
NEK1Q96PY6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.75■□□□□ 0.59
NEK1Q96PY6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NEK1Q96PY6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEK1Q96PY6 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEK1Q96PY6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEK1Q96PY6 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NEK1Q96PY6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
NEK1Q96PY6 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.74■□□□□ 0.59
NEK1Q96PY6 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NEK1Q96PY6 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NEK1Q96PY6 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.74■□□□□ 0.59
NEK1Q96PY6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.74■□□□□ 0.59
NEK1Q96PY6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.74■□□□□ 0.59
NEK1Q96PY6 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NEK1Q96PY6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.74■□□□□ 0.59
NEK1Q96PY6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 CYMP-203ENST00000474680 1263 ntBASIC18.74■□□□□ 0.59
NEK1Q96PY6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.74■□□□□ 0.59
NEK1Q96PY6 MIR6069-201ENST00000620069 79 ntBASIC18.74■□□□□ 0.59
NEK1Q96PY6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 AL033527.5-202ENST00000641632 1098 ntBASIC18.74■□□□□ 0.59
NEK1Q96PY6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
NEK1Q96PY6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.74■□□□□ 0.59
NEK1Q96PY6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.74■□□□□ 0.59
NEK1Q96PY6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NEK1Q96PY6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NEK1Q96PY6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEK1Q96PY6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEK1Q96PY6 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEK1Q96PY6 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NEK1Q96PY6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NEK1Q96PY6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NEK1Q96PY6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEK1Q96PY6 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 RFPL4AP1-201ENST00000530883 850 ntBASIC18.73■□□□□ 0.59
NEK1Q96PY6 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEK1Q96PY6 TEX28P1-201ENST00000613479 1221 ntBASIC18.73■□□□□ 0.59
NEK1Q96PY6 TEX28P2-201ENST00000617764 1221 ntBASIC18.73■□□□□ 0.59
NEK1Q96PY6 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NEK1Q96PY6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEK1Q96PY6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NEK1Q96PY6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.73■□□□□ 0.59
NEK1Q96PY6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 FER1L4-210ENST00000615531 5998 ntBASIC18.72■□□□□ 0.59
NEK1Q96PY6 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms