Protein–RNA interactions for Protein: Q96LM1

LINC00615, Putative uncharacterized protein encoded by LINC00615, humanhuman

Predicted RBP Predictions only

Length 132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00615Q96LM1 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00615Q96LM1 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00615Q96LM1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LINC00615Q96LM1 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC00615Q96LM1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
LINC00615Q96LM1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00615Q96LM1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC00615Q96LM1 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.34■□□□□ 0.05
LINC00615Q96LM1 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.34■□□□□ 0.05
LINC00615Q96LM1 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LINC00615Q96LM1 AP003680.1-201ENST00000598970 3660 ntBASIC15.33■□□□□ 0.05
LINC00615Q96LM1 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
LINC00615Q96LM1 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.33■□□□□ 0.05
LINC00615Q96LM1 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.33■□□□□ 0.05
LINC00615Q96LM1 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
LINC00615Q96LM1 AC090616.6-203ENST00000579186 1945 ntBASIC15.33■□□□□ 0.05
LINC00615Q96LM1 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
LINC00615Q96LM1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
LINC00615Q96LM1 AC084364.1-201ENST00000551967 1556 ntBASIC15.33■□□□□ 0.05
LINC00615Q96LM1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 RPL5P21-201ENST00000404620 815 ntBASIC15.33■□□□□ 0.04
LINC00615Q96LM1 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 TMEM261P1-201ENST00000604899 340 ntBASIC15.33■□□□□ 0.04
LINC00615Q96LM1 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00615Q96LM1 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 AC104596.2-201ENST00000512793 793 ntBASIC15.32■□□□□ 0.04
LINC00615Q96LM1 AC123567.1-201ENST00000548294 1261 ntBASIC15.32■□□□□ 0.04
LINC00615Q96LM1 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 BRI3BPP1-201ENST00000594224 787 ntBASIC15.32■□□□□ 0.04
LINC00615Q96LM1 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.32■□□□□ 0.04
LINC00615Q96LM1 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00615Q96LM1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00615Q96LM1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00615Q96LM1 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00615Q96LM1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00615Q96LM1 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00615Q96LM1 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.31■□□□□ 0.04
LINC00615Q96LM1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LINC00615Q96LM1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms