Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 AL928921.2-201ENST00000641325 2442 ntBASIC15.29■□□□□ 0.04
CLPTM1LQ96KA5 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1LQ96KA5 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1LQ96KA5 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CLPTM1LQ96KA5 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1LQ96KA5 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1LQ96KA5 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1LQ96KA5 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1LQ96KA5 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CLPTM1LQ96KA5 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1LQ96KA5 ZBED1P1-201ENST00000502364 1930 ntBASIC15.29■□□□□ 0.04
CLPTM1LQ96KA5 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CLPTM1LQ96KA5 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1LQ96KA5 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1LQ96KA5 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1LQ96KA5 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1LQ96KA5 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPTM1LQ96KA5 AC012569.1-201ENST00000591191 1524 ntBASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 ELK2BP-201ENST00000415014 1224 ntBASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 AC245100.5-201ENST00000452108 331 ntBASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 AL591684.3-201ENST00000605187 298 ntBASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 AL805961.1-202ENST00000641562 540 ntBASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 AC097359.2-201ENST00000604992 2389 ntBASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.28■□□□□ 0.04
CLPTM1LQ96KA5 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 WASH6P-202ENST00000359512 1437 ntBASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 AC005332.1-201ENST00000577698 1310 ntBASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 AC129492.6-201ENST00000611383 1305 ntBASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLPTM1LQ96KA5 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLPTM1LQ96KA5 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CLPTM1LQ96KA5 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLPTM1LQ96KA5 PTENP1-202ENST00000532280 3996 ntBASIC15.27■□□□□ 0.03
CLPTM1LQ96KA5 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CLPTM1LQ96KA5 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLPTM1LQ96KA5 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLPTM1LQ96KA5 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CLPTM1LQ96KA5 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLPTM1LQ96KA5 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLPTM1LQ96KA5 BX640514.1-201ENST00000583223 1918 ntBASIC15.27■□□□□ 0.03
CLPTM1LQ96KA5 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.27■□□□□ 0.03
CLPTM1LQ96KA5 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.27■□□□□ 0.03
CLPTM1LQ96KA5 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLPTM1LQ96KA5 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLPTM1LQ96KA5 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.27■□□□□ 0.03
CLPTM1LQ96KA5 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.27■□□□□ 0.03
CLPTM1LQ96KA5 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLPTM1LQ96KA5 AP001282.1-201ENST00000531301 1499 ntBASIC15.27■□□□□ 0.03
CLPTM1LQ96KA5 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLPTM1LQ96KA5 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLPTM1LQ96KA5 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CLPTM1LQ96KA5 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms