Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.62■□□□□ 0.25
RNF34Q969K3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF34Q969K3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.62■□□□□ 0.25
RNF34Q969K3 AL390955.2-201ENST00000603032 514 ntBASIC16.62■□□□□ 0.25
RNF34Q969K3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF34Q969K3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF34Q969K3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF34Q969K3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF34Q969K3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF34Q969K3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF34Q969K3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF34Q969K3 AC011477.6-201ENST00000604980 1927 ntBASIC16.62■□□□□ 0.25
RNF34Q969K3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF34Q969K3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF34Q969K3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF34Q969K3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF34Q969K3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF34Q969K3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF34Q969K3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF34Q969K3 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF34Q969K3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF34Q969K3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF34Q969K3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF34Q969K3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF34Q969K3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF34Q969K3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RNF34Q969K3 AC112504.1-201ENST00000623415 1841 ntBASIC16.61■□□□□ 0.25
RNF34Q969K3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RNF34Q969K3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF34Q969K3 PCDHA3-202ENST00000532566 4594 ntBASIC16.61■□□□□ 0.25
RNF34Q969K3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RNF34Q969K3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF34Q969K3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RNF34Q969K3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF34Q969K3 TNRC18P3-201ENST00000441896 2691 ntBASIC16.61■□□□□ 0.25
RNF34Q969K3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF34Q969K3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF34Q969K3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF34Q969K3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF34Q969K3 FO393414.2-201ENST00000405153 598 ntBASIC16.61■□□□□ 0.25
RNF34Q969K3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF34Q969K3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
RNF34Q969K3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF34Q969K3 INGX-202ENST00000489074 768 ntBASIC16.61■□□□□ 0.25
RNF34Q969K3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF34Q969K3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF34Q969K3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF34Q969K3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF34Q969K3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF34Q969K3 AL450472.2-201ENST00000603663 1156 ntBASIC16.61■□□□□ 0.25
RNF34Q969K3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
RNF34Q969K3 AL033527.5-202ENST00000641632 1098 ntBASIC16.61■□□□□ 0.25
RNF34Q969K3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF34Q969K3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF34Q969K3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
RNF34Q969K3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF34Q969K3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF34Q969K3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF34Q969K3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF34Q969K3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF34Q969K3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF34Q969K3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF34Q969K3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF34Q969K3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
RNF34Q969K3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF34Q969K3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF34Q969K3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RNF34Q969K3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF34Q969K3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF34Q969K3 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF34Q969K3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.6■□□□□ 0.25
RNF34Q969K3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF34Q969K3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF34Q969K3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF34Q969K3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF34Q969K3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF34Q969K3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF34Q969K3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF34Q969K3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF34Q969K3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF34Q969K3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF34Q969K3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF34Q969K3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF34Q969K3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF34Q969K3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RNF34Q969K3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF34Q969K3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
RNF34Q969K3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RNF34Q969K3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF34Q969K3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.6■□□□□ 0.25
RNF34Q969K3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF34Q969K3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.6■□□□□ 0.25
RNF34Q969K3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.6■□□□□ 0.25
RNF34Q969K3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.6■□□□□ 0.25
RNF34Q969K3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.6■□□□□ 0.25
RNF34Q969K3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF34Q969K3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF34Q969K3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF34Q969K3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF34Q969K3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms