Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
PHF3Q92576 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PHF3Q92576 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PHF3Q92576 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF3Q92576 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF3Q92576 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF3Q92576 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF3Q92576 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF3Q92576 AC069224.1-201ENST00000566372 1715 ntBASIC14.28□□□□□ -0.12
PHF3Q92576 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF3Q92576 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF3Q92576 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF3Q92576 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.28□□□□□ -0.12
PHF3Q92576 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PHF3Q92576 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.28□□□□□ -0.12
PHF3Q92576 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PHF3Q92576 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PHF3Q92576 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF3Q92576 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.28□□□□□ -0.12
PHF3Q92576 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF3Q92576 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PHF3Q92576 MIR648-201ENST00000385046 94 ntBASIC14.28□□□□□ -0.12
PHF3Q92576 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.28□□□□□ -0.12
PHF3Q92576 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.28□□□□□ -0.12
PHF3Q92576 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.28□□□□□ -0.12
PHF3Q92576 AC123567.1-201ENST00000548294 1261 ntBASIC14.28□□□□□ -0.12
PHF3Q92576 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.28□□□□□ -0.12
PHF3Q92576 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PHF3Q92576 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.28□□□□□ -0.12
PHF3Q92576 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.28□□□□□ -0.12
PHF3Q92576 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PHF3Q92576 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PHF3Q92576 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PHF3Q92576 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PHF3Q92576 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF3Q92576 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF3Q92576 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
PHF3Q92576 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PHF3Q92576 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PHF3Q92576 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.27□□□□□ -0.12
PHF3Q92576 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PHF3Q92576 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PHF3Q92576 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PHF3Q92576 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PHF3Q92576 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PHF3Q92576 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PHF3Q92576 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.27□□□□□ -0.12
PHF3Q92576 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.27□□□□□ -0.12
PHF3Q92576 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.27□□□□□ -0.12
PHF3Q92576 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PHF3Q92576 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
PHF3Q92576 AC025048.3-201ENST00000590609 569 ntBASIC14.27□□□□□ -0.12
PHF3Q92576 AC005702.4-201ENST00000618393 416 ntBASIC14.27□□□□□ -0.12
PHF3Q92576 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.27□□□□□ -0.12
PHF3Q92576 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PHF3Q92576 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PHF3Q92576 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
PHF3Q92576 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.27□□□□□ -0.12
PHF3Q92576 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PHF3Q92576 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PHF3Q92576 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PHF3Q92576 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PHF3Q92576 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PHF3Q92576 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.27□□□□□ -0.13
PHF3Q92576 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PHF3Q92576 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PHF3Q92576 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PHF3Q92576 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PHF3Q92576 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.27□□□□□ -0.13
PHF3Q92576 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PHF3Q92576 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.27□□□□□ -0.13
PHF3Q92576 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.27□□□□□ -0.13
PHF3Q92576 MIR6805-201ENST00000615055 62 ntBASIC14.27□□□□□ -0.13
PHF3Q92576 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PHF3Q92576 Z97205.2-201ENST00000564697 1639 ntBASIC14.27□□□□□ -0.13
PHF3Q92576 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PHF3Q92576 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PHF3Q92576 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PHF3Q92576 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.27□□□□□ -0.13
PHF3Q92576 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PHF3Q92576 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHF3Q92576 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHF3Q92576 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PHF3Q92576 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.26□□□□□ -0.13
PHF3Q92576 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.26□□□□□ -0.13
PHF3Q92576 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHF3Q92576 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.26□□□□□ -0.13
PHF3Q92576 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
PHF3Q92576 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.26□□□□□ -0.13
PHF3Q92576 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.26□□□□□ -0.13
PHF3Q92576 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.26□□□□□ -0.13
PHF3Q92576 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.26□□□□□ -0.13
PHF3Q92576 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PHF3Q92576 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHF3Q92576 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.26□□□□□ -0.13
PHF3Q92576 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHF3Q92576 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.26□□□□□ -0.13
PHF3Q92576 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.26□□□□□ -0.13
PHF3Q92576 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PHF3Q92576 AC007541.1-201ENST00000570282 1469 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms