Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.85■□□□□ 0.29
DDX1Q92499 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
DDX1Q92499 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
DDX1Q92499 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.85■□□□□ 0.29
DDX1Q92499 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.85■□□□□ 0.29
DDX1Q92499 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DDX1Q92499 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DDX1Q92499 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.85■□□□□ 0.29
DDX1Q92499 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
DDX1Q92499 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DDX1Q92499 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DDX1Q92499 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DDX1Q92499 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
DDX1Q92499 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
DDX1Q92499 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DDX1Q92499 AC006486.2-201ENST00000624246 2199 ntBASIC16.85■□□□□ 0.29
DDX1Q92499 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.85■□□□□ 0.29
DDX1Q92499 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
DDX1Q92499 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
DDX1Q92499 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
DDX1Q92499 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DDX1Q92499 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DDX1Q92499 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DDX1Q92499 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
DDX1Q92499 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DDX1Q92499 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DDX1Q92499 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
DDX1Q92499 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
DDX1Q92499 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DDX1Q92499 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
DDX1Q92499 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DDX1Q92499 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DDX1Q92499 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DDX1Q92499 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.84■□□□□ 0.29
DDX1Q92499 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
DDX1Q92499 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DDX1Q92499 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DDX1Q92499 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DDX1Q92499 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.84■□□□□ 0.29
DDX1Q92499 RPL37AP1-201ENST00000412502 279 ntBASIC16.84■□□□□ 0.29
DDX1Q92499 AC074338.1-201ENST00000416825 156 ntBASIC16.84■□□□□ 0.29
DDX1Q92499 ARSEP1-201ENST00000420443 635 ntBASIC16.84■□□□□ 0.29
DDX1Q92499 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
DDX1Q92499 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.84■□□□□ 0.29
DDX1Q92499 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
DDX1Q92499 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
DDX1Q92499 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
DDX1Q92499 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
DDX1Q92499 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.84■□□□□ 0.29
DDX1Q92499 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
DDX1Q92499 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DDX1Q92499 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
DDX1Q92499 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
DDX1Q92499 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
DDX1Q92499 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.84■□□□□ 0.29
DDX1Q92499 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DDX1Q92499 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
DDX1Q92499 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
DDX1Q92499 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
DDX1Q92499 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
DDX1Q92499 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
DDX1Q92499 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.83■□□□□ 0.29
DDX1Q92499 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DDX1Q92499 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
DDX1Q92499 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DDX1Q92499 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DDX1Q92499 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
DDX1Q92499 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.83■□□□□ 0.28
DDX1Q92499 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
DDX1Q92499 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DDX1Q92499 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
DDX1Q92499 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
DDX1Q92499 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.83■□□□□ 0.28
DDX1Q92499 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DDX1Q92499 TREML5P-201ENST00000421694 576 ntBASIC16.83■□□□□ 0.28
DDX1Q92499 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DDX1Q92499 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.83■□□□□ 0.28
DDX1Q92499 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
DDX1Q92499 TARDBPP1-201ENST00000442013 1203 ntBASIC16.83■□□□□ 0.28
DDX1Q92499 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DDX1Q92499 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
DDX1Q92499 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.83■□□□□ 0.28
DDX1Q92499 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
DDX1Q92499 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.83■□□□□ 0.28
DDX1Q92499 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DDX1Q92499 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.83■□□□□ 0.28
DDX1Q92499 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.83■□□□□ 0.28
DDX1Q92499 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
DDX1Q92499 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.83■□□□□ 0.28
DDX1Q92499 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.83■□□□□ 0.28
DDX1Q92499 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
DDX1Q92499 AL589739.1-201ENST00000607720 493 ntBASIC16.83■□□□□ 0.28
DDX1Q92499 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DDX1Q92499 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
DDX1Q92499 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.83■□□□□ 0.28
DDX1Q92499 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DDX1Q92499 AC138035.3-201ENST00000622706 2791 ntBASIC16.83■□□□□ 0.28
DDX1Q92499 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
DDX1Q92499 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DDX1Q92499 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms