Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 AL031284.1-201ENST00000419297 478 ntBASIC13.8□□□□□ -0.2
CCDC107Q8WV48 AL450487.1-201ENST00000426799 995 ntBASIC13.8□□□□□ -0.2
CCDC107Q8WV48 AL513480.1-201ENST00000451731 511 ntBASIC13.8□□□□□ -0.2
CCDC107Q8WV48 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 CXCL1P1-201ENST00000502804 216 ntBASIC13.8□□□□□ -0.2
CCDC107Q8WV48 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 ACTL9-202ENST00000612068 1252 ntBASIC13.8□□□□□ -0.2
CCDC107Q8WV48 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 AC020765.3-201ENST00000613051 740 ntBASIC13.8□□□□□ -0.2
CCDC107Q8WV48 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 AC098831.1-202ENST00000438821 336 ntBASIC13.79□□□□□ -0.2
CCDC107Q8WV48 FAM185BP-201ENST00000443595 716 ntBASIC13.79□□□□□ -0.2
CCDC107Q8WV48 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 AP002469.2-201ENST00000531724 424 ntBASIC13.79□□□□□ -0.2
CCDC107Q8WV48 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 MIR4515-201ENST00000584082 81 ntBASIC13.79□□□□□ -0.2
CCDC107Q8WV48 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC107Q8WV48 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms