Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 AC008738.7-201ENST00000609744 511 ntBASIC16.78■□□□□ 0.28
UBA3Q8TBC4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 AC022144.1-201ENST00000602255 1580 ntBASIC16.77■□□□□ 0.28
UBA3Q8TBC4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.77■□□□□ 0.28
UBA3Q8TBC4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 RNA5SP421-201ENST00000516864 134 ntBASIC16.77■□□□□ 0.28
UBA3Q8TBC4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.77■□□□□ 0.28
UBA3Q8TBC4 AF228730.6-201ENST00000641497 218 ntBASIC16.77■□□□□ 0.28
UBA3Q8TBC4 AC084121.3-201ENST00000641716 218 ntBASIC16.77■□□□□ 0.28
UBA3Q8TBC4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
UBA3Q8TBC4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBA3Q8TBC4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.77■□□□□ 0.27
UBA3Q8TBC4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBA3Q8TBC4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBA3Q8TBC4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBA3Q8TBC4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.77■□□□□ 0.27
UBA3Q8TBC4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 SDHAP3-202ENST00000515467 728 ntBASIC16.76■□□□□ 0.27
UBA3Q8TBC4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 LINC01115-203ENST00000606068 577 ntBASIC16.76■□□□□ 0.27
UBA3Q8TBC4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 AC004840.1-201ENST00000636359 365 ntBASIC16.76■□□□□ 0.27
UBA3Q8TBC4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBA3Q8TBC4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms