Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 MIR658-201ENST00000385210 100 ntBASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 HLA-V-201ENST00000429037 534 ntBASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 MIR6805-201ENST00000615055 62 ntBASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 AC022210.1-201ENST00000449856 793 ntBASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 AC008735.3-201ENST00000596646 500 ntBASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 AL512343.1-201ENST00000605837 169 ntBASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 RPSAP52-203ENST00000622976 1023 ntBASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHKBP1Q8TBC3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms