Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
LMO3Q8TAP4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.91■□□□□ 0.3
LMO3Q8TAP4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LMO3Q8TAP4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
LMO3Q8TAP4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LMO3Q8TAP4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.91■□□□□ 0.3
LMO3Q8TAP4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LMO3Q8TAP4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LMO3Q8TAP4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.91■□□□□ 0.3
LMO3Q8TAP4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LMO3Q8TAP4 DBET-201ENST00000630918 3363 ntBASIC16.91■□□□□ 0.3
LMO3Q8TAP4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.91■□□□□ 0.3
LMO3Q8TAP4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LMO3Q8TAP4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.91■□□□□ 0.3
LMO3Q8TAP4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 AC103702.1-201ENST00000548801 2630 ntBASIC16.9■□□□□ 0.3
LMO3Q8TAP4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 SDHAP3-202ENST00000515467 728 ntBASIC16.9■□□□□ 0.3
LMO3Q8TAP4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMO3Q8TAP4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LMO3Q8TAP4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LMO3Q8TAP4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.89■□□□□ 0.3
LMO3Q8TAP4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 AC015922.1-201ENST00000421102 1152 ntBASIC16.89■□□□□ 0.29
LMO3Q8TAP4 AC055876.3-201ENST00000431496 288 ntBASIC16.89■□□□□ 0.29
LMO3Q8TAP4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 GPALPP1-207ENST00000611650 899 ntBASIC16.89■□□□□ 0.29
LMO3Q8TAP4 AC138649.4-201ENST00000612222 287 ntBASIC16.89■□□□□ 0.29
LMO3Q8TAP4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms