Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 AC074032.1-201ENST00000548468 698 ntTSL 3 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 ABCB9-204ENST00000392439 3791 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 KLC2-202ENST00000394065 3755 ntTSL 2 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 LMX1A-202ENST00000342310 3545 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 PHACTR3-209ENST00000541461 2349 ntTSL 2 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 SLC4A11-201ENST00000380056 3094 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 DMBX1-202ENST00000371956 2882 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 EIF4BP5-201ENST00000567338 1795 ntBASIC9.68□□□□□ -0.86
SVIPQ8NHG7 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 BAHD1-202ENST00000560846 4432 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 SPATA3-AS1-201ENST00000414876 3508 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 SLC43A3-201ENST00000352187 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 SLC2A4-201ENST00000317370 3426 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SVIPQ8NHG7 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 C1orf116-202ENST00000461135 3142 ntTSL 2 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 CUX1-202ENST00000292538 2930 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 FCHO1-208ENST00000595033 2907 ntTSL 2 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 MADD-206ENST00000402192 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 MAGED1-202ENST00000375695 2875 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 LINC02140-202ENST00000566649 2017 ntTSL 2 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 AC105105.1-201ENST00000591360 2553 ntTSL 2 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 ASB9-209ENST00000546332 1947 ntTSL 2 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 BAG6-236ENST00000375964 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 AC015849.4-201ENST00000603678 421 ntTSL 5 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 SLC12A4-219ENST00000576616 3768 ntTSL 2 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 RNF6-203ENST00000381588 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 TTI2-202ENST00000431156 2363 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 AC005776.2-201ENST00000609708 1769 ntTSL 5 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 TBC1D8B-201ENST00000276175 3538 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 FLII-215ENST00000545457 3975 ntTSL 2 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 ADCY5-201ENST00000309879 2841 ntTSL 2 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 CDH1-214ENST00000621016 3304 ntTSL 5 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 USP39-220ENST00000613444 2161 ntTSL 2 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 FBF1-212ENST00000636174 3626 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
SVIPQ8NHG7 CFAP69-213ENST00000497910 3032 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 POLR2J4-202ENST00000427076 6466 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 AC018521.7-201ENST00000580282 2927 ntBASIC9.66□□□□□ -0.86
SVIPQ8NHG7 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 SLC7A7-204ENST00000397532 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms