Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
COL22A1Q8NFW1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
COL22A1Q8NFW1 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL22A1Q8NFW1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
COL22A1Q8NFW1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL22A1Q8NFW1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
COL22A1Q8NFW1 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 SAMD11P1-201ENST00000571429 661 ntBASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 AL136301.1-201ENST00000615830 422 ntBASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 FAM90A7P-201ENST00000382628 1395 ntBASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 FAM90A23P-201ENST00000400136 1395 ntBASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 SHC1P1-201ENST00000425230 1745 ntBASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 PUDPP3-201ENST00000445368 636 ntBASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 PAM16-211ENST00000575848 518 ntTSL 3 BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC20.53■□□□□ 0.88
COL22A1Q8NFW1 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL22A1Q8NFW1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.52■□□□□ 0.88
COL22A1Q8NFW1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL22A1Q8NFW1 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL22A1Q8NFW1 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
COL22A1Q8NFW1 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
COL22A1Q8NFW1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL22A1Q8NFW1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
COL22A1Q8NFW1 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL22A1Q8NFW1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL22A1Q8NFW1 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC20.52■□□□□ 0.88
COL22A1Q8NFW1 SOD2-202ENST00000367054 815 ntTSL 2 BASIC20.52■□□□□ 0.88
COL22A1Q8NFW1 PIN4P1-201ENST00000451079 396 ntBASIC20.52■□□□□ 0.88
COL22A1Q8NFW1 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL22A1Q8NFW1 RN7SL258P-201ENST00000478664 300 ntBASIC20.52■□□□□ 0.88
COL22A1Q8NFW1 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC20.52■□□□□ 0.88
COL22A1Q8NFW1 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC20.52■□□□□ 0.88
COL22A1Q8NFW1 NAT9-211ENST00000580632 799 ntTSL 3 BASIC20.52■□□□□ 0.88
COL22A1Q8NFW1 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
COL22A1Q8NFW1 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
COL22A1Q8NFW1 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL22A1Q8NFW1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.52■□□□□ 0.88
COL22A1Q8NFW1 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC20.52■□□□□ 0.87
COL22A1Q8NFW1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
COL22A1Q8NFW1 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC20.52■□□□□ 0.87
COL22A1Q8NFW1 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
COL22A1Q8NFW1 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 RPL7P35-201ENST00000446943 740 ntBASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 AC005632.3-201ENST00000605544 308 ntBASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 Z98259.2-201ENST00000641583 609 ntBASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 AL008718.2-201ENST00000609206 1313 ntBASIC20.51■□□□□ 0.87
COL22A1Q8NFW1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.5■□□□□ 0.87
COL22A1Q8NFW1 AC020916.1-201ENST00000587762 1774 ntBASIC20.5■□□□□ 0.87
COL22A1Q8NFW1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.5■□□□□ 0.87
COL22A1Q8NFW1 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL22A1Q8NFW1 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC20.5■□□□□ 0.87
COL22A1Q8NFW1 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms