Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CPEB3Q8NE35 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.91□□□□□ -0.18
CPEB3Q8NE35 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CPEB3Q8NE35 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
CPEB3Q8NE35 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
CPEB3Q8NE35 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CPEB3Q8NE35 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CPEB3Q8NE35 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
CPEB3Q8NE35 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 CETN4P-206ENST00000642099 2168 ntBASIC13.9□□□□□ -0.18
CPEB3Q8NE35 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 AC107890.1-201ENST00000422478 521 ntBASIC13.9□□□□□ -0.18
CPEB3Q8NE35 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 PHKG1P2-201ENST00000457537 863 ntBASIC13.9□□□□□ -0.18
CPEB3Q8NE35 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.9□□□□□ -0.18
CPEB3Q8NE35 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.9□□□□□ -0.18
CPEB3Q8NE35 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.9□□□□□ -0.18
CPEB3Q8NE35 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.9□□□□□ -0.19
CPEB3Q8NE35 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.9□□□□□ -0.19
CPEB3Q8NE35 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CPEB3Q8NE35 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.89□□□□□ -0.19
CPEB3Q8NE35 AZGP1P1-201ENST00000411909 902 ntBASIC13.89□□□□□ -0.19
CPEB3Q8NE35 AL080243.2-201ENST00000418783 582 ntBASIC13.89□□□□□ -0.19
CPEB3Q8NE35 HIST3H2BA-201ENST00000436555 524 ntBASIC13.89□□□□□ -0.19
CPEB3Q8NE35 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 AC069120.2-201ENST00000524091 540 ntBASIC13.89□□□□□ -0.19
CPEB3Q8NE35 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 DUX4L27-201ENST00000554796 1261 ntBASIC13.89□□□□□ -0.19
CPEB3Q8NE35 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 AC140878.1-201ENST00000565277 250 ntBASIC13.89□□□□□ -0.19
CPEB3Q8NE35 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 AL450472.2-201ENST00000603663 1156 ntBASIC13.89□□□□□ -0.19
CPEB3Q8NE35 SPDYE12P-201ENST00000618416 771 ntBASIC13.89□□□□□ -0.19
CPEB3Q8NE35 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.89□□□□□ -0.19
CPEB3Q8NE35 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms