Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LSMEM1Q8N8F7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.58□□□□□ -0.08
LSMEM1Q8N8F7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LSMEM1Q8N8F7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LSMEM1Q8N8F7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
LSMEM1Q8N8F7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LSMEM1Q8N8F7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.58□□□□□ -0.08
LSMEM1Q8N8F7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.58□□□□□ -0.08
LSMEM1Q8N8F7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.58□□□□□ -0.08
LSMEM1Q8N8F7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LSMEM1Q8N8F7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LSMEM1Q8N8F7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 AC018892.3-201ENST00000623986 2499 ntBASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 MIR4313-201ENST00000580760 101 ntBASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 AL450472.2-201ENST00000603663 1156 ntBASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 PPT1-215ENST00000641471 2368 ntBASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSMEM1Q8N8F7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 AC073347.1-201ENST00000421633 2643 ntBASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 GRK6P1-201ENST00000400595 1711 ntBASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 AC013268.4-201ENST00000637413 2228 ntBASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 PHKG1P2-201ENST00000457537 863 ntBASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 AC136621.1-201ENST00000624017 2304 ntBASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 AC090616.6-203ENST00000579186 1945 ntBASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms