Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.88□□□□□ -0.03
DEPDC4Q8N2C3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.88□□□□□ -0.03
DEPDC4Q8N2C3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.88□□□□□ -0.03
DEPDC4Q8N2C3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.88□□□□□ -0.03
DEPDC4Q8N2C3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.88□□□□□ -0.03
DEPDC4Q8N2C3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.88□□□□□ -0.03
DEPDC4Q8N2C3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.88□□□□□ -0.03
DEPDC4Q8N2C3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
DEPDC4Q8N2C3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DEPDC4Q8N2C3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DEPDC4Q8N2C3 AC007686.3-201ENST00000619017 3487 ntBASIC14.88□□□□□ -0.03
DEPDC4Q8N2C3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DEPDC4Q8N2C3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DEPDC4Q8N2C3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DEPDC4Q8N2C3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
DEPDC4Q8N2C3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.88□□□□□ -0.03
DEPDC4Q8N2C3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
DEPDC4Q8N2C3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.88□□□□□ -0.03
DEPDC4Q8N2C3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
DEPDC4Q8N2C3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DEPDC4Q8N2C3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
DEPDC4Q8N2C3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 AC005412.3-201ENST00000580309 715 ntBASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEPDC4Q8N2C3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 AC015656.1-201ENST00000624209 3578 ntBASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 PGAM5P1-201ENST00000518923 814 ntBASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 AC007064.4-201ENST00000637740 555 ntBASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 AC079781.4-201ENST00000641908 219 ntBASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DEPDC4Q8N2C3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms