Protein–RNA interactions for Protein: Q8IVN8

SBSPON, Somatomedin-B and thrombospondin type-1 domain-containing protein, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPONQ8IVN8 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 AC234783.1-201ENST00000441761 496 ntBASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 FADS2-205ENST00000517839 469 ntTSL 3 BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 MIR4259-201ENST00000584466 101 ntBASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SBSPONQ8IVN8 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 AC007389.4-201ENST00000454674 793 ntBASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 TIMM17BP1-201ENST00000545713 516 ntBASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 WFDC1-204ENST00000613603 549 ntBASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 AL139011.1-202ENST00000642063 584 ntBASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 MBP-202ENST00000355994 2772 ntTSL 5 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SBSPONQ8IVN8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms