Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 LINC00982-205ENST00000420957 435 ntBASIC13.25□□□□□ -0.29
ZNF546Q86UE3 SPDYE13P-201ENST00000445314 798 ntBASIC13.25□□□□□ -0.29
ZNF546Q86UE3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 AC083849.1-201ENST00000615227 514 ntBASIC13.25□□□□□ -0.29
ZNF546Q86UE3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 AL928921.2-201ENST00000641325 2442 ntBASIC13.25□□□□□ -0.29
ZNF546Q86UE3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ZNF546Q86UE3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 AC148477.5-201ENST00000625164 1645 ntBASIC13.24□□□□□ -0.29
ZNF546Q86UE3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 AC073508.3-201ENST00000619697 1419 ntBASIC13.24□□□□□ -0.29
ZNF546Q86UE3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 AL020989.1-201ENST00000422979 469 ntBASIC13.24□□□□□ -0.29
ZNF546Q86UE3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.24□□□□□ -0.29
ZNF546Q86UE3 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ZNF546Q86UE3 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms