Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 SERBP1P3-201ENST00000459980 809 ntBASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 AC243562.2-201ENST00000561247 970 ntBASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 AC008761.3-201ENST00000624803 892 ntBASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 AC004840.1-201ENST00000636359 365 ntBASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 AC073347.1-201ENST00000421633 2643 ntBASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFWD3Q6PCD5 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 TNRC18P2-201ENST00000417666 2714 ntBASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 AC004987.2-201ENST00000395959 1148 ntBASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 HAUS4P1-201ENST00000406739 1145 ntBASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 HIST3H2BA-201ENST00000436555 524 ntBASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.55■□□□□ 0.24
RFWD3Q6PCD5 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms