Protein–RNA interactions for Protein: Q5JUK3

KCNT1, Potassium channel subfamily T member 1, humanhuman

Predictions only

Length 1,230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1Q5JUK3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 INGX-202ENST00000489074 768 ntBASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 RNA5SP421-201ENST00000516864 134 ntBASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 AC026150.2-201ENST00000564693 1156 ntBASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 AC239800.4-201ENST00000603712 296 ntBASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 AC018529.1-201ENST00000613063 361 ntBASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 SSR4P1-203ENST00000599569 2260 ntBASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 AC009090.5-201ENST00000624886 2285 ntBASIC16.65■□□□□ 0.26
KCNT1Q5JUK3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
KCNT1Q5JUK3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
KCNT1Q5JUK3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
KCNT1Q5JUK3 FO538757.1-201ENST00000623083 1397 ntBASIC16.64■□□□□ 0.26
KCNT1Q5JUK3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 KLF2P3-201ENST00000451977 1087 ntBASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 BANF1P1-201ENST00000553684 263 ntBASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 AC003101.2-201ENST00000612557 442 ntBASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNT1Q5JUK3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KCNT1Q5JUK3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.63■□□□□ 0.25
KCNT1Q5JUK3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNT1Q5JUK3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNT1Q5JUK3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
KCNT1Q5JUK3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.63■□□□□ 0.25
KCNT1Q5JUK3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.63■□□□□ 0.25
KCNT1Q5JUK3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNT1Q5JUK3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNT1Q5JUK3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.63■□□□□ 0.25
KCNT1Q5JUK3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
KCNT1Q5JUK3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.63■□□□□ 0.25
KCNT1Q5JUK3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNT1Q5JUK3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNT1Q5JUK3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms