Protein–RNA interactions for Protein: P84550

SKOR1, SKI family transcriptional corepressor 1, humanhuman

Predictions only

Length 965 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1P84550 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SKOR1P84550 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.71■□□□□ 0.27
SKOR1P84550 WASH6P-202ENST00000359512 1437 ntBASIC16.71■□□□□ 0.27
SKOR1P84550 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SKOR1P84550 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.71■□□□□ 0.27
SKOR1P84550 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.71■□□□□ 0.27
SKOR1P84550 AC232323.1-201ENST00000540724 2099 ntBASIC16.71■□□□□ 0.27
SKOR1P84550 REXO1L5P-201ENST00000622260 2098 ntBASIC16.71■□□□□ 0.27
SKOR1P84550 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
SKOR1P84550 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.71■□□□□ 0.27
SKOR1P84550 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SKOR1P84550 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SKOR1P84550 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.71■□□□□ 0.27
SKOR1P84550 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SKOR1P84550 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SKOR1P84550 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SKOR1P84550 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SKOR1P84550 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SKOR1P84550 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SKOR1P84550 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SKOR1P84550 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SKOR1P84550 AL645939.2-201ENST00000427340 991 ntBASIC16.71■□□□□ 0.27
SKOR1P84550 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.71■□□□□ 0.27
SKOR1P84550 KRT18P34-201ENST00000488218 1270 ntBASIC16.71■□□□□ 0.27
SKOR1P84550 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.71■□□□□ 0.27
SKOR1P84550 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.71■□□□□ 0.27
SKOR1P84550 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SKOR1P84550 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SKOR1P84550 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.71■□□□□ 0.27
SKOR1P84550 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SKOR1P84550 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.71■□□□□ 0.27
SKOR1P84550 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SKOR1P84550 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SKOR1P84550 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.71■□□□□ 0.27
SKOR1P84550 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SKOR1P84550 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SKOR1P84550 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SKOR1P84550 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SKOR1P84550 FLJ16779-201ENST00000612722 7638 ntBASIC16.71■□□□□ 0.27
SKOR1P84550 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
SKOR1P84550 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SKOR1P84550 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SKOR1P84550 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.71■□□□□ 0.27
SKOR1P84550 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SKOR1P84550 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
SKOR1P84550 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.71■□□□□ 0.26
SKOR1P84550 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
SKOR1P84550 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SKOR1P84550 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SKOR1P84550 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SKOR1P84550 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SKOR1P84550 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.7■□□□□ 0.26
SKOR1P84550 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
SKOR1P84550 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SKOR1P84550 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
SKOR1P84550 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.7■□□□□ 0.26
SKOR1P84550 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.7■□□□□ 0.26
SKOR1P84550 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.7■□□□□ 0.26
SKOR1P84550 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.7■□□□□ 0.26
SKOR1P84550 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.7■□□□□ 0.26
SKOR1P84550 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SKOR1P84550 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.7■□□□□ 0.26
SKOR1P84550 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SKOR1P84550 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.7■□□□□ 0.26
SKOR1P84550 CNN2P11-201ENST00000429351 262 ntBASIC16.7■□□□□ 0.26
SKOR1P84550 HTR5BP-201ENST00000430851 1154 ntBASIC16.7■□□□□ 0.26
SKOR1P84550 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.7■□□□□ 0.26
SKOR1P84550 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.7■□□□□ 0.26
SKOR1P84550 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.7■□□□□ 0.26
SKOR1P84550 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.7■□□□□ 0.26
SKOR1P84550 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.7■□□□□ 0.26
SKOR1P84550 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SKOR1P84550 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SKOR1P84550 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.7■□□□□ 0.26
SKOR1P84550 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.7■□□□□ 0.26
SKOR1P84550 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
SKOR1P84550 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SKOR1P84550 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SKOR1P84550 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
SKOR1P84550 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SKOR1P84550 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SKOR1P84550 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SKOR1P84550 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SKOR1P84550 LINC00552-201ENST00000625151 2579 ntBASIC16.7■□□□□ 0.26
SKOR1P84550 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SKOR1P84550 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
SKOR1P84550 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SKOR1P84550 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SKOR1P84550 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.69■□□□□ 0.26
SKOR1P84550 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.69■□□□□ 0.26
SKOR1P84550 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SKOR1P84550 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.69■□□□□ 0.26
SKOR1P84550 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SKOR1P84550 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SKOR1P84550 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SKOR1P84550 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SKOR1P84550 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SKOR1P84550 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.69■□□□□ 0.26
SKOR1P84550 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SKOR1P84550 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms