Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-1P78426 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-1P78426 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-1P78426 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-1P78426 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-1P78426 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-1P78426 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-1P78426 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 AC132872.4-202ENST00000622924 2756 ntBASIC14.05□□□□□ -0.16
NKX6-1P78426 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.05□□□□□ -0.16
NKX6-1P78426 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.05□□□□□ -0.16
NKX6-1P78426 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NKX6-1P78426 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.05□□□□□ -0.16
NKX6-1P78426 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.05□□□□□ -0.16
NKX6-1P78426 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NKX6-1P78426 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
NKX6-1P78426 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
NKX6-1P78426 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.05□□□□□ -0.16
NKX6-1P78426 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.05□□□□□ -0.16
NKX6-1P78426 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.05□□□□□ -0.16
NKX6-1P78426 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.05□□□□□ -0.16
NKX6-1P78426 GIMAP3P-201ENST00000495150 836 ntBASIC14.05□□□□□ -0.16
NKX6-1P78426 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 HILS1-202ENST00000545329 423 ntBASIC14.05□□□□□ -0.16
NKX6-1P78426 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.05□□□□□ -0.16
NKX6-1P78426 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
NKX6-1P78426 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
NKX6-1P78426 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 U82695.1-201ENST00000635752 1889 ntBASIC14.05□□□□□ -0.16
NKX6-1P78426 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 AL035456.1-201ENST00000456064 1369 ntBASIC14.05□□□□□ -0.16
NKX6-1P78426 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.05□□□□□ -0.16
NKX6-1P78426 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.05□□□□□ -0.16
NKX6-1P78426 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
NKX6-1P78426 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.05□□□□□ -0.16
NKX6-1P78426 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-1P78426 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
NKX6-1P78426 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
NKX6-1P78426 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.04□□□□□ -0.16
NKX6-1P78426 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NKX6-1P78426 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX6-1P78426 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX6-1P78426 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX6-1P78426 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NKX6-1P78426 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX6-1P78426 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX6-1P78426 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.04□□□□□ -0.16
NKX6-1P78426 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX6-1P78426 ME2P1-201ENST00000426028 1970 ntBASIC14.04□□□□□ -0.16
NKX6-1P78426 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX6-1P78426 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NKX6-1P78426 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
NKX6-1P78426 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX6-1P78426 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NKX6-1P78426 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NKX6-1P78426 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX6-1P78426 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX6-1P78426 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.04□□□□□ -0.16
NKX6-1P78426 RNA5SP410-201ENST00000516285 106 ntBASIC14.04□□□□□ -0.16
NKX6-1P78426 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
NKX6-1P78426 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.04□□□□□ -0.16
NKX6-1P78426 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.04□□□□□ -0.16
NKX6-1P78426 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.04□□□□□ -0.16
NKX6-1P78426 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.04□□□□□ -0.16
NKX6-1P78426 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.04□□□□□ -0.16
NKX6-1P78426 AC061975.2-201ENST00000581722 295 ntBASIC14.04□□□□□ -0.16
NKX6-1P78426 AC024267.1-201ENST00000582320 895 ntBASIC14.04□□□□□ -0.16
NKX6-1P78426 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.04□□□□□ -0.16
NKX6-1P78426 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.04□□□□□ -0.16
NKX6-1P78426 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.04□□□□□ -0.16
NKX6-1P78426 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.04□□□□□ -0.16
NKX6-1P78426 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX6-1P78426 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms