Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
AP1S1P61966 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.93■□□□□ 0.14
AP1S1P61966 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S1P61966 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.93■□□□□ 0.14
AP1S1P61966 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
AP1S1P61966 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
AP1S1P61966 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP1S1P61966 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP1S1P61966 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP1S1P61966 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.92■□□□□ 0.14
AP1S1P61966 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP1S1P61966 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.92■□□□□ 0.14
AP1S1P61966 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP1S1P61966 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP1S1P61966 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP1S1P61966 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP1S1P61966 KRT18P64-201ENST00000434946 1219 ntBASIC15.92■□□□□ 0.14
AP1S1P61966 AC093004.1-201ENST00000508850 424 ntBASIC15.92■□□□□ 0.14
AP1S1P61966 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.92■□□□□ 0.14
AP1S1P61966 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP1S1P61966 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.92■□□□□ 0.14
AP1S1P61966 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.92■□□□□ 0.14
AP1S1P61966 AC004233.3-201ENST00000607794 1269 ntBASIC15.92■□□□□ 0.14
AP1S1P61966 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.92■□□□□ 0.14
AP1S1P61966 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
AP1S1P61966 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP1S1P61966 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP1S1P61966 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP1S1P61966 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.92■□□□□ 0.14
AP1S1P61966 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
AP1S1P61966 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.92■□□□□ 0.14
AP1S1P61966 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
AP1S1P61966 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.92■□□□□ 0.14
AP1S1P61966 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
AP1S1P61966 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
AP1S1P61966 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
AP1S1P61966 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP1S1P61966 AC008894.3-201ENST00000624324 3103 ntBASIC15.92■□□□□ 0.14
AP1S1P61966 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP1S1P61966 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP1S1P61966 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
AP1S1P61966 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.92■□□□□ 0.14
AP1S1P61966 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
AP1S1P61966 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S1P61966 AC138969.3-201ENST00000546612 1459 ntBASIC15.91■□□□□ 0.14
AP1S1P61966 AC138932.2-201ENST00000548268 1459 ntBASIC15.91■□□□□ 0.14
AP1S1P61966 AC126755.4-201ENST00000549796 1459 ntBASIC15.91■□□□□ 0.14
AP1S1P61966 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S1P61966 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S1P61966 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S1P61966 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S1P61966 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S1P61966 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S1P61966 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.91■□□□□ 0.14
AP1S1P61966 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S1P61966 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S1P61966 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S1P61966 SPDYE19P-201ENST00000338590 713 ntBASIC15.91■□□□□ 0.14
AP1S1P61966 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S1P61966 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
AP1S1P61966 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S1P61966 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.91■□□□□ 0.14
AP1S1P61966 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S1P61966 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S1P61966 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.91■□□□□ 0.14
AP1S1P61966 AL589987.1-201ENST00000453380 819 ntBASIC15.91■□□□□ 0.14
AP1S1P61966 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.91■□□□□ 0.14
AP1S1P61966 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S1P61966 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.91■□□□□ 0.14
AP1S1P61966 TPRX2P-201ENST00000535362 881 ntBASIC15.91■□□□□ 0.14
AP1S1P61966 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.91■□□□□ 0.14
AP1S1P61966 AC004790.1-201ENST00000612686 536 ntBASIC15.91■□□□□ 0.14
AP1S1P61966 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
AP1S1P61966 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.91■□□□□ 0.14
AP1S1P61966 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S1P61966 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S1P61966 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S1P61966 AP003680.1-201ENST00000598970 3660 ntBASIC15.91■□□□□ 0.14
AP1S1P61966 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S1P61966 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S1P61966 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S1P61966 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP1S1P61966 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.91■□□□□ 0.14
AP1S1P61966 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.91■□□□□ 0.14
AP1S1P61966 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.91■□□□□ 0.14
AP1S1P61966 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
AP1S1P61966 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S1P61966 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S1P61966 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.9■□□□□ 0.14
AP1S1P61966 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S1P61966 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S1P61966 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S1P61966 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S1P61966 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S1P61966 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S1P61966 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S1P61966 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S1P61966 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.9■□□□□ 0.14
AP1S1P61966 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S1P61966 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms