Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.98□□□□□ -0.17
SEC61A1P61619 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SEC61A1P61619 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.98□□□□□ -0.17
SEC61A1P61619 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SEC61A1P61619 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SEC61A1P61619 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SEC61A1P61619 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SEC61A1P61619 AC254562.1-201ENST00000417586 456 ntBASIC13.98□□□□□ -0.17
SEC61A1P61619 CNN2P11-201ENST00000429351 262 ntBASIC13.98□□□□□ -0.17
SEC61A1P61619 AC140658.5-201ENST00000438532 169 ntBASIC13.98□□□□□ -0.17
SEC61A1P61619 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.98□□□□□ -0.17
SEC61A1P61619 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
SEC61A1P61619 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.98□□□□□ -0.17
SEC61A1P61619 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.98□□□□□ -0.17
SEC61A1P61619 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.98□□□□□ -0.17
SEC61A1P61619 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.98□□□□□ -0.17
SEC61A1P61619 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SEC61A1P61619 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.98□□□□□ -0.17
SEC61A1P61619 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.98□□□□□ -0.17
SEC61A1P61619 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.98□□□□□ -0.17
SEC61A1P61619 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SEC61A1P61619 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.98□□□□□ -0.17
SEC61A1P61619 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SEC61A1P61619 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SEC61A1P61619 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.98□□□□□ -0.17
SEC61A1P61619 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.98□□□□□ -0.17
SEC61A1P61619 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SEC61A1P61619 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.98□□□□□ -0.17
SEC61A1P61619 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
SEC61A1P61619 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SEC61A1P61619 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.98□□□□□ -0.17
SEC61A1P61619 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SEC61A1P61619 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.98□□□□□ -0.17
SEC61A1P61619 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SEC61A1P61619 GGT3P-204ENST00000453783 1664 ntBASIC13.98□□□□□ -0.17
SEC61A1P61619 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SEC61A1P61619 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.98□□□□□ -0.17
SEC61A1P61619 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SEC61A1P61619 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SEC61A1P61619 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
SEC61A1P61619 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61A1P61619 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.97□□□□□ -0.17
SEC61A1P61619 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61A1P61619 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SEC61A1P61619 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.97□□□□□ -0.17
SEC61A1P61619 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61A1P61619 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
SEC61A1P61619 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.97□□□□□ -0.17
SEC61A1P61619 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SEC61A1P61619 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61A1P61619 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61A1P61619 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61A1P61619 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SEC61A1P61619 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61A1P61619 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61A1P61619 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SEC61A1P61619 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61A1P61619 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
SEC61A1P61619 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.97□□□□□ -0.17
SEC61A1P61619 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.97□□□□□ -0.17
SEC61A1P61619 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
SEC61A1P61619 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61A1P61619 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61A1P61619 ACTG1P14-201ENST00000446382 1122 ntBASIC13.97□□□□□ -0.17
SEC61A1P61619 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
SEC61A1P61619 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.97□□□□□ -0.17
SEC61A1P61619 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.97□□□□□ -0.17
SEC61A1P61619 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.97□□□□□ -0.17
SEC61A1P61619 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
SEC61A1P61619 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.97□□□□□ -0.17
SEC61A1P61619 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SEC61A1P61619 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SEC61A1P61619 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61A1P61619 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SEC61A1P61619 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
SEC61A1P61619 GGT4P-201ENST00000623672 1708 ntBASIC13.97□□□□□ -0.17
SEC61A1P61619 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.97□□□□□ -0.17
SEC61A1P61619 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
SEC61A1P61619 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61A1P61619 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.97□□□□□ -0.17
SEC61A1P61619 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.97□□□□□ -0.17
SEC61A1P61619 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61A1P61619 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.97□□□□□ -0.17
SEC61A1P61619 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.97□□□□□ -0.17
SEC61A1P61619 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61A1P61619 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61A1P61619 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61A1P61619 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61A1P61619 AC006449.6-201ENST00000612330 2296 ntBASIC13.97□□□□□ -0.17
SEC61A1P61619 AC139749.1-202ENST00000617529 3139 ntBASIC13.97□□□□□ -0.17
SEC61A1P61619 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61A1P61619 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SEC61A1P61619 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.96□□□□□ -0.17
SEC61A1P61619 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.96□□□□□ -0.17
SEC61A1P61619 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SEC61A1P61619 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SEC61A1P61619 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SEC61A1P61619 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SEC61A1P61619 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SEC61A1P61619 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms