Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PER3P56645 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.76□□□□□ -0.05
PER3P56645 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.76□□□□□ -0.05
PER3P56645 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
PER3P56645 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.76□□□□□ -0.05
PER3P56645 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.76□□□□□ -0.05
PER3P56645 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.76□□□□□ -0.05
PER3P56645 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 AL512384.1-201ENST00000406683 331 ntBASIC14.76□□□□□ -0.05
PER3P56645 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.76□□□□□ -0.05
PER3P56645 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PER3P56645 MTND6P24-201ENST00000440466 518 ntBASIC14.76□□□□□ -0.05
PER3P56645 AC009477.1-201ENST00000452936 217 ntBASIC14.76□□□□□ -0.05
PER3P56645 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PER3P56645 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 HILS1-202ENST00000545329 423 ntBASIC14.76□□□□□ -0.05
PER3P56645 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.76□□□□□ -0.05
PER3P56645 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.76□□□□□ -0.05
PER3P56645 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.76□□□□□ -0.05
PER3P56645 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 AL589739.1-201ENST00000607720 493 ntBASIC14.76□□□□□ -0.05
PER3P56645 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PER3P56645 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
PER3P56645 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
PER3P56645 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
PER3P56645 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PER3P56645 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PER3P56645 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
PER3P56645 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PER3P56645 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PER3P56645 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PER3P56645 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.75□□□□□ -0.05
PER3P56645 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PER3P56645 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.75□□□□□ -0.05
PER3P56645 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PER3P56645 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PER3P56645 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
PER3P56645 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PER3P56645 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PER3P56645 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.75□□□□□ -0.05
PER3P56645 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.75□□□□□ -0.05
PER3P56645 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.75□□□□□ -0.05
PER3P56645 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.75□□□□□ -0.05
PER3P56645 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.75□□□□□ -0.05
PER3P56645 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.75□□□□□ -0.05
PER3P56645 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.75□□□□□ -0.05
PER3P56645 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.75□□□□□ -0.05
PER3P56645 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.75□□□□□ -0.05
PER3P56645 AC073389.1-201ENST00000595595 795 ntBASIC14.75□□□□□ -0.05
PER3P56645 AL162274.1-201ENST00000617191 1098 ntBASIC14.75□□□□□ -0.05
PER3P56645 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.75□□□□□ -0.05
PER3P56645 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.75□□□□□ -0.05
PER3P56645 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PER3P56645 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.75□□□□□ -0.05
PER3P56645 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PER3P56645 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PER3P56645 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.75□□□□□ -0.05
PER3P56645 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms