Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC19.34■□□□□ 0.69
NUP98P52948 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC19.34■□□□□ 0.69
NUP98P52948 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC19.34■□□□□ 0.69
NUP98P52948 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NUP98P52948 RNA5SP486-201ENST00000515961 83 ntBASIC19.34■□□□□ 0.69
NUP98P52948 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.34■□□□□ 0.69
NUP98P52948 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
NUP98P52948 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NUP98P52948 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUP98P52948 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.34■□□□□ 0.69
NUP98P52948 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NUP98P52948 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC19.34■□□□□ 0.69
NUP98P52948 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NUP98P52948 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUP98P52948 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUP98P52948 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
NUP98P52948 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC19.33■□□□□ 0.69
NUP98P52948 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NUP98P52948 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NUP98P52948 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.33■□□□□ 0.69
NUP98P52948 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
NUP98P52948 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NUP98P52948 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
NUP98P52948 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC19.33■□□□□ 0.69
NUP98P52948 AC114812.1-204ENST00000449669 728 ntBASIC19.33■□□□□ 0.69
NUP98P52948 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC19.33■□□□□ 0.69
NUP98P52948 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.69
NUP98P52948 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.33■□□□□ 0.69
NUP98P52948 ENPP7P14-201ENST00000621765 1040 ntBASIC19.33■□□□□ 0.69
NUP98P52948 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NUP98P52948 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.33■□□□□ 0.69
NUP98P52948 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NUP98P52948 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.33■□□□□ 0.68
NUP98P52948 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NUP98P52948 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NUP98P52948 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.33■□□□□ 0.68
NUP98P52948 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NUP98P52948 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NUP98P52948 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NUP98P52948 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.33■□□□□ 0.68
NUP98P52948 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NUP98P52948 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NUP98P52948 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
NUP98P52948 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP98P52948 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP98P52948 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
NUP98P52948 GHSR-202ENST00000427970 912 ntBASIC19.32■□□□□ 0.68
NUP98P52948 RGS5-214ENST00000429865 754 ntTSL 3 BASIC19.32■□□□□ 0.68
NUP98P52948 HLA-K-203ENST00000430151 1046 ntBASIC19.32■□□□□ 0.68
NUP98P52948 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NUP98P52948 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NUP98P52948 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.32■□□□□ 0.68
NUP98P52948 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC19.32■□□□□ 0.68
NUP98P52948 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NUP98P52948 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC19.32■□□□□ 0.68
NUP98P52948 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP98P52948 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP98P52948 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NUP98P52948 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NUP98P52948 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP98P52948 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP98P52948 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP98P52948 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP98P52948 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP98P52948 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP98P52948 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NUP98P52948 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC19.32■□□□□ 0.68
NUP98P52948 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP98P52948 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP98P52948 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC19.32■□□□□ 0.68
NUP98P52948 CSH2-202ENST00000345366 598 ntTSL 5 BASIC19.32■□□□□ 0.68
NUP98P52948 NME6-203ENST00000415644 849 ntTSL 2 BASIC19.32■□□□□ 0.68
NUP98P52948 NUS1P3-201ENST00000423502 862 ntBASIC19.32■□□□□ 0.68
NUP98P52948 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC19.32■□□□□ 0.68
NUP98P52948 REEP1-202ENST00000453231 940 ntTSL 2 BASIC19.32■□□□□ 0.68
NUP98P52948 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19.32■□□□□ 0.68
NUP98P52948 DUX4L47-201ENST00000566374 394 ntBASIC19.32■□□□□ 0.68
NUP98P52948 PPY2P-201ENST00000582808 702 ntBASIC19.32■□□□□ 0.68
NUP98P52948 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NUP98P52948 AC091271.1-201ENST00000611877 1162 ntBASIC19.32■□□□□ 0.68
NUP98P52948 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP98P52948 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUP98P52948 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.32■□□□□ 0.68
NUP98P52948 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NUP98P52948 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NUP98P52948 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NUP98P52948 AC127383.1-201ENST00000444697 1800 ntBASIC19.31■□□□□ 0.68
NUP98P52948 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUP98P52948 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUP98P52948 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUP98P52948 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUP98P52948 OARD1-212ENST00000482515 832 ntTSL 2 BASIC19.31■□□□□ 0.68
NUP98P52948 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC19.31■□□□□ 0.68
NUP98P52948 AL022328.3-201ENST00000607943 679 ntBASIC19.31■□□□□ 0.68
NUP98P52948 AL021578.1-201ENST00000613646 709 ntBASIC19.31■□□□□ 0.68
NUP98P52948 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.31■□□□□ 0.68
NUP98P52948 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC19.31■□□□□ 0.68
NUP98P52948 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUP98P52948 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NUP98P52948 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms