Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
EFNA3P52797 AC026691.1-201ENST00000602502 2017 ntBASIC14.82□□□□□ -0.04
EFNA3P52797 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
EFNA3P52797 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNA3P52797 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNA3P52797 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNA3P52797 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
EFNA3P52797 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
EFNA3P52797 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
EFNA3P52797 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
EFNA3P52797 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNA3P52797 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNA3P52797 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
EFNA3P52797 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNA3P52797 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.81□□□□□ -0.04
EFNA3P52797 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNA3P52797 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNA3P52797 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNA3P52797 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNA3P52797 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNA3P52797 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.81□□□□□ -0.04
EFNA3P52797 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.81□□□□□ -0.04
EFNA3P52797 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
EFNA3P52797 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
EFNA3P52797 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNA3P52797 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.81□□□□□ -0.04
EFNA3P52797 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.81□□□□□ -0.04
EFNA3P52797 AL035252.4-201ENST00000624174 288 ntBASIC14.81□□□□□ -0.04
EFNA3P52797 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.81□□□□□ -0.04
EFNA3P52797 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
EFNA3P52797 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
EFNA3P52797 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
EFNA3P52797 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNA3P52797 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.81□□□□□ -0.04
EFNA3P52797 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNA3P52797 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
EFNA3P52797 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
EFNA3P52797 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
EFNA3P52797 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
EFNA3P52797 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNA3P52797 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EFNA3P52797 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EFNA3P52797 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EFNA3P52797 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
EFNA3P52797 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNA3P52797 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EFNA3P52797 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNA3P52797 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNA3P52797 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EFNA3P52797 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNA3P52797 DOC2GP-204ENST00000639052 2548 ntBASIC14.8□□□□□ -0.04
EFNA3P52797 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNA3P52797 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
EFNA3P52797 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNA3P52797 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EFNA3P52797 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EFNA3P52797 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.8□□□□□ -0.04
EFNA3P52797 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.8□□□□□ -0.04
EFNA3P52797 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.8□□□□□ -0.04
EFNA3P52797 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.8□□□□□ -0.04
EFNA3P52797 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.8□□□□□ -0.04
EFNA3P52797 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.8□□□□□ -0.04
EFNA3P52797 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.8□□□□□ -0.04
EFNA3P52797 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.8□□□□□ -0.04
EFNA3P52797 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.8□□□□□ -0.04
EFNA3P52797 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.8□□□□□ -0.04
EFNA3P52797 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.8□□□□□ -0.04
EFNA3P52797 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.8□□□□□ -0.04
EFNA3P52797 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.8□□□□□ -0.04
EFNA3P52797 AC099568.2-201ENST00000609194 695 ntBASIC14.8□□□□□ -0.04
EFNA3P52797 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.8□□□□□ -0.04
EFNA3P52797 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.8□□□□□ -0.04
EFNA3P52797 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EFNA3P52797 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
EFNA3P52797 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
EFNA3P52797 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.8□□□□□ -0.04
EFNA3P52797 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNA3P52797 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNA3P52797 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
EFNA3P52797 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.8□□□□□ -0.04
EFNA3P52797 AL139384.1-201ENST00000612143 3047 ntBASIC14.8□□□□□ -0.04
EFNA3P52797 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EFNA3P52797 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNA3P52797 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.8□□□□□ -0.04
EFNA3P52797 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
EFNA3P52797 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.8□□□□□ -0.04
EFNA3P52797 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.8□□□□□ -0.04
EFNA3P52797 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNA3P52797 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EFNA3P52797 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNA3P52797 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNA3P52797 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EFNA3P52797 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA3P52797 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.79□□□□□ -0.04
EFNA3P52797 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA3P52797 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA3P52797 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA3P52797 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
EFNA3P52797 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
EFNA3P52797 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms