Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.43■□□□□ 0.06
CLCN2P51788 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.43■□□□□ 0.06
CLCN2P51788 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CLCN2P51788 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.43■□□□□ 0.06
CLCN2P51788 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.43■□□□□ 0.06
CLCN2P51788 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.43■□□□□ 0.06
CLCN2P51788 AC005237.2-201ENST00000434368 219 ntBASIC15.43■□□□□ 0.06
CLCN2P51788 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.43■□□□□ 0.06
CLCN2P51788 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.43■□□□□ 0.06
CLCN2P51788 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.43■□□□□ 0.06
CLCN2P51788 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CLCN2P51788 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CLCN2P51788 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
CLCN2P51788 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.43■□□□□ 0.06
CLCN2P51788 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.43■□□□□ 0.06
CLCN2P51788 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.43■□□□□ 0.06
CLCN2P51788 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.43■□□□□ 0.06
CLCN2P51788 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.43■□□□□ 0.06
CLCN2P51788 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CLCN2P51788 REXO1L8P-201ENST00000604378 1897 ntBASIC15.43■□□□□ 0.06
CLCN2P51788 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
CLCN2P51788 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CLCN2P51788 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.43■□□□□ 0.06
CLCN2P51788 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CLCN2P51788 AC136621.1-201ENST00000624017 2304 ntBASIC15.43■□□□□ 0.06
CLCN2P51788 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.43■□□□□ 0.06
CLCN2P51788 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.43■□□□□ 0.06
CLCN2P51788 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.43■□□□□ 0.06
CLCN2P51788 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.43■□□□□ 0.06
CLCN2P51788 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN2P51788 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CLCN2P51788 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CLCN2P51788 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CLCN2P51788 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCN2P51788 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCN2P51788 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CLCN2P51788 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
CLCN2P51788 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCN2P51788 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
CLCN2P51788 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.42■□□□□ 0.06
CLCN2P51788 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCN2P51788 AC023141.5-201ENST00000458585 616 ntBASIC15.42■□□□□ 0.06
CLCN2P51788 KRT8P23-201ENST00000560090 1207 ntBASIC15.42■□□□□ 0.06
CLCN2P51788 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.42■□□□□ 0.06
CLCN2P51788 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
CLCN2P51788 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 AL359183.1-201ENST00000623796 2132 ntBASIC15.42■□□□□ 0.06
CLCN2P51788 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCN2P51788 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
CLCN2P51788 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCN2P51788 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCN2P51788 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.42■□□□□ 0.06
CLCN2P51788 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN2P51788 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms