Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CASP4P49662 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CASP4P49662 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CASP4P49662 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.27■□□□□ 0.36
CASP4P49662 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CASP4P49662 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.27■□□□□ 0.36
CASP4P49662 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CASP4P49662 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.27■□□□□ 0.36
CASP4P49662 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.27■□□□□ 0.36
CASP4P49662 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.27■□□□□ 0.36
CASP4P49662 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.27■□□□□ 0.36
CASP4P49662 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CASP4P49662 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CASP4P49662 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.27■□□□□ 0.35
CASP4P49662 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CASP4P49662 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CASP4P49662 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.27■□□□□ 0.35
CASP4P49662 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CASP4P49662 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.27■□□□□ 0.35
CASP4P49662 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.27■□□□□ 0.35
CASP4P49662 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.27■□□□□ 0.35
CASP4P49662 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CASP4P49662 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CASP4P49662 AC022532.1-201ENST00000624563 1728 ntBASIC17.27■□□□□ 0.35
CASP4P49662 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CASP4P49662 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CASP4P49662 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.27■□□□□ 0.35
CASP4P49662 DBET-201ENST00000630918 3363 ntBASIC17.26■□□□□ 0.35
CASP4P49662 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASP4P49662 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASP4P49662 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CASP4P49662 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASP4P49662 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CASP4P49662 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.26■□□□□ 0.35
CASP4P49662 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.26■□□□□ 0.35
CASP4P49662 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASP4P49662 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.26■□□□□ 0.35
CASP4P49662 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASP4P49662 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CASP4P49662 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASP4P49662 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASP4P49662 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.26■□□□□ 0.35
CASP4P49662 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CASP4P49662 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASP4P49662 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASP4P49662 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CASP4P49662 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.26■□□□□ 0.35
CASP4P49662 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.26■□□□□ 0.35
CASP4P49662 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.26■□□□□ 0.35
CASP4P49662 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.26■□□□□ 0.35
CASP4P49662 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.26■□□□□ 0.35
CASP4P49662 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.26■□□□□ 0.35
CASP4P49662 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASP4P49662 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CASP4P49662 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASP4P49662 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASP4P49662 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASP4P49662 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASP4P49662 AC087481.3-201ENST00000602886 1894 ntBASIC17.26■□□□□ 0.35
CASP4P49662 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.26■□□□□ 0.35
CASP4P49662 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASP4P49662 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASP4P49662 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.26■□□□□ 0.35
CASP4P49662 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASP4P49662 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASP4P49662 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASP4P49662 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASP4P49662 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CASP4P49662 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASP4P49662 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.25■□□□□ 0.35
CASP4P49662 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASP4P49662 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASP4P49662 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.25■□□□□ 0.35
CASP4P49662 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASP4P49662 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.25■□□□□ 0.35
CASP4P49662 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.25■□□□□ 0.35
CASP4P49662 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASP4P49662 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.25■□□□□ 0.35
CASP4P49662 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASP4P49662 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASP4P49662 AC100757.3-201ENST00000622361 1406 ntBASIC17.25■□□□□ 0.35
CASP4P49662 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CASP4P49662 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.25■□□□□ 0.35
CASP4P49662 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.25■□□□□ 0.35
CASP4P49662 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.25■□□□□ 0.35
CASP4P49662 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.25■□□□□ 0.35
CASP4P49662 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.25■□□□□ 0.35
CASP4P49662 IGHV3-42-201ENST00000520410 361 ntBASIC17.25■□□□□ 0.35
CASP4P49662 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.25■□□□□ 0.35
CASP4P49662 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.25■□□□□ 0.35
CASP4P49662 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASP4P49662 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.25■□□□□ 0.35
CASP4P49662 AC010336.2-201ENST00000564226 506 ntBASIC17.25■□□□□ 0.35
CASP4P49662 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.25■□□□□ 0.35
CASP4P49662 AC027796.2-201ENST00000575326 344 ntBASIC17.25■□□□□ 0.35
CASP4P49662 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASP4P49662 AC025048.3-201ENST00000590609 569 ntBASIC17.25■□□□□ 0.35
CASP4P49662 AL158211.3-201ENST00000607385 239 ntBASIC17.25■□□□□ 0.35
CASP4P49662 AC005702.4-201ENST00000618393 416 ntBASIC17.25■□□□□ 0.35
CASP4P49662 AL390754.1-201ENST00000619088 582 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms