Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC34P49427 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CDC34P49427 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.6□□□□□ -0.39
CDC34P49427 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CDC34P49427 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CDC34P49427 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.6□□□□□ -0.39
CDC34P49427 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CDC34P49427 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CDC34P49427 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.6□□□□□ -0.39
CDC34P49427 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.6□□□□□ -0.39
CDC34P49427 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC34P49427 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CDC34P49427 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CDC34P49427 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC34P49427 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.6□□□□□ -0.39
CDC34P49427 KRT8P44-201ENST00000441609 1350 ntBASIC12.6□□□□□ -0.39
CDC34P49427 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.6□□□□□ -0.39
CDC34P49427 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CDC34P49427 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC34P49427 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
CDC34P49427 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC34P49427 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
CDC34P49427 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC34P49427 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC34P49427 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.6□□□□□ -0.39
CDC34P49427 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC34P49427 MED16-201ENST00000269814 1199 ntTSL 5 BASIC12.6□□□□□ -0.39
CDC34P49427 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC34P49427 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC34P49427 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.6□□□□□ -0.39
CDC34P49427 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC34P49427 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.6□□□□□ -0.39
CDC34P49427 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
CDC34P49427 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CDC34P49427 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.6□□□□□ -0.39
CDC34P49427 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC34P49427 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.6□□□□□ -0.39
CDC34P49427 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
CDC34P49427 AL139288.1-201ENST00000623748 933 ntBASIC12.6□□□□□ -0.39
CDC34P49427 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC34P49427 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CDC34P49427 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.6□□□□□ -0.39
CDC34P49427 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CDC34P49427 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CDC34P49427 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.6□□□□□ -0.39
CDC34P49427 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.6□□□□□ -0.39
CDC34P49427 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC34P49427 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.6□□□□□ -0.39
CDC34P49427 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CDC34P49427 AC129492.6-201ENST00000611383 1305 ntBASIC12.6□□□□□ -0.39
CDC34P49427 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
CDC34P49427 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CDC34P49427 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC34P49427 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
CDC34P49427 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.59□□□□□ -0.39
CDC34P49427 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CDC34P49427 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.59□□□□□ -0.39
CDC34P49427 AC005912.2-201ENST00000619492 2400 ntBASIC12.59□□□□□ -0.39
CDC34P49427 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.59□□□□□ -0.39
CDC34P49427 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.59□□□□□ -0.39
CDC34P49427 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CDC34P49427 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12.59□□□□□ -0.39
CDC34P49427 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CDC34P49427 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC12.59□□□□□ -0.39
CDC34P49427 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
CDC34P49427 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CDC34P49427 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC12.59□□□□□ -0.39
CDC34P49427 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 TSSC2-201ENST00000450217 709 ntBASIC12.59□□□□□ -0.39
CDC34P49427 AC104819.1-201ENST00000504587 486 ntBASIC12.59□□□□□ -0.39
CDC34P49427 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.59□□□□□ -0.39
CDC34P49427 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.59□□□□□ -0.39
CDC34P49427 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CDC34P49427 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.59□□□□□ -0.39
CDC34P49427 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.59□□□□□ -0.39
CDC34P49427 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.59□□□□□ -0.39
CDC34P49427 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC12.59□□□□□ -0.39
CDC34P49427 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms