Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC105233.6-201ENST00000642093 218 ntBASIC17.08■□□□□ 0.32
TNFSF9P41273 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TNFSF9P41273 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TNFSF9P41273 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.08■□□□□ 0.32
TNFSF9P41273 AC092850.2-201ENST00000623821 2697 ntBASIC17.08■□□□□ 0.32
TNFSF9P41273 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TNFSF9P41273 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFSF9P41273 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.08■□□□□ 0.32
TNFSF9P41273 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFSF9P41273 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFSF9P41273 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFSF9P41273 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFSF9P41273 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TNFSF9P41273 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.07■□□□□ 0.32
TNFSF9P41273 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNFSF9P41273 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TNFSF9P41273 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNFSF9P41273 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TNFSF9P41273 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.07■□□□□ 0.32
TNFSF9P41273 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.07■□□□□ 0.32
TNFSF9P41273 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNFSF9P41273 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNFSF9P41273 AL391825.1-201ENST00000457671 1364 ntBASIC17.07■□□□□ 0.32
TNFSF9P41273 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.07■□□□□ 0.32
TNFSF9P41273 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TNFSF9P41273 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNFSF9P41273 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNFSF9P41273 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TNFSF9P41273 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNFSF9P41273 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.07■□□□□ 0.32
TNFSF9P41273 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.07■□□□□ 0.32
TNFSF9P41273 DGCR5-201ENST00000399539 862 ntBASIC17.07■□□□□ 0.32
TNFSF9P41273 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TNFSF9P41273 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.07■□□□□ 0.32
TNFSF9P41273 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.07■□□□□ 0.32
TNFSF9P41273 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TNFSF9P41273 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.07■□□□□ 0.32
TNFSF9P41273 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.07■□□□□ 0.32
TNFSF9P41273 AC123567.1-201ENST00000548294 1261 ntBASIC17.07■□□□□ 0.32
TNFSF9P41273 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.07■□□□□ 0.32
TNFSF9P41273 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.07■□□□□ 0.32
TNFSF9P41273 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.07■□□□□ 0.32
TNFSF9P41273 AC099568.2-201ENST00000609194 695 ntBASIC17.07■□□□□ 0.32
TNFSF9P41273 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNFSF9P41273 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNFSF9P41273 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.07■□□□□ 0.32
TNFSF9P41273 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNFSF9P41273 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNFSF9P41273 AC022188.1-201ENST00000620960 1664 ntBASIC17.07■□□□□ 0.32
TNFSF9P41273 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TNFSF9P41273 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
TNFSF9P41273 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.06■□□□□ 0.32
TNFSF9P41273 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.06■□□□□ 0.32
TNFSF9P41273 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.06■□□□□ 0.32
TNFSF9P41273 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.06■□□□□ 0.32
TNFSF9P41273 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TNFSF9P41273 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
TNFSF9P41273 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNFSF9P41273 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNFSF9P41273 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.06■□□□□ 0.32
TNFSF9P41273 MEP1AP4-201ENST00000423244 1087 ntBASIC17.06■□□□□ 0.32
TNFSF9P41273 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.06■□□□□ 0.32
TNFSF9P41273 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.06■□□□□ 0.32
TNFSF9P41273 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TNFSF9P41273 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TNFSF9P41273 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNFSF9P41273 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.06■□□□□ 0.32
TNFSF9P41273 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.06■□□□□ 0.32
TNFSF9P41273 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.06■□□□□ 0.32
TNFSF9P41273 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.06■□□□□ 0.32
TNFSF9P41273 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.06■□□□□ 0.32
TNFSF9P41273 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.06■□□□□ 0.32
TNFSF9P41273 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.06■□□□□ 0.32
TNFSF9P41273 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TNFSF9P41273 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.06■□□□□ 0.32
TNFSF9P41273 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.06■□□□□ 0.32
TNFSF9P41273 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNFSF9P41273 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNFSF9P41273 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.06■□□□□ 0.32
TNFSF9P41273 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.06■□□□□ 0.32
TNFSF9P41273 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.06■□□□□ 0.32
TNFSF9P41273 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.06■□□□□ 0.32
TNFSF9P41273 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNFSF9P41273 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TNFSF9P41273 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNFSF9P41273 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TNFSF9P41273 HYMAI-201ENST00000635591 3347 ntBASIC17.06■□□□□ 0.32
TNFSF9P41273 AL121723.1-201ENST00000445194 1519 ntBASIC17.06■□□□□ 0.32
TNFSF9P41273 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.06■□□□□ 0.32
TNFSF9P41273 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TNFSF9P41273 AC138969.3-201ENST00000546612 1459 ntBASIC17.05■□□□□ 0.32
TNFSF9P41273 AC138932.2-201ENST00000548268 1459 ntBASIC17.05■□□□□ 0.32
TNFSF9P41273 AC126755.4-201ENST00000549796 1459 ntBASIC17.05■□□□□ 0.32
TNFSF9P41273 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TNFSF9P41273 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TNFSF9P41273 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TNFSF9P41273 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TNFSF9P41273 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.05■□□□□ 0.32
TNFSF9P41273 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TNFSF9P41273 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms