Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.81□□□□□ -0.2
HLA-DMAP28067 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DMAP28067 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HLA-DMAP28067 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.8□□□□□ -0.2
HLA-DMAP28067 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DMAP28067 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.8□□□□□ -0.2
HLA-DMAP28067 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DMAP28067 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DMAP28067 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DMAP28067 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.8□□□□□ -0.2
HLA-DMAP28067 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DMAP28067 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DMAP28067 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.8□□□□□ -0.2
HLA-DMAP28067 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.8□□□□□ -0.2
HLA-DMAP28067 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DMAP28067 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.8□□□□□ -0.2
HLA-DMAP28067 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DMAP28067 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.8□□□□□ -0.2
HLA-DMAP28067 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.8□□□□□ -0.2
HLA-DMAP28067 AL022326.1-202ENST00000641533 845 ntBASIC13.8□□□□□ -0.2
HLA-DMAP28067 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DMAP28067 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.8□□□□□ -0.2
HLA-DMAP28067 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DMAP28067 AC027612.1-201ENST00000445234 2395 ntBASIC13.8□□□□□ -0.2
HLA-DMAP28067 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DMAP28067 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HLA-DMAP28067 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
HLA-DMAP28067 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
HLA-DMAP28067 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DMAP28067 ST20-AS1-201ENST00000560255 4223 ntBASIC13.79□□□□□ -0.2
HLA-DMAP28067 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DMAP28067 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.79□□□□□ -0.2
HLA-DMAP28067 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HLA-DMAP28067 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.79□□□□□ -0.2
HLA-DMAP28067 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DMAP28067 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.79□□□□□ -0.2
HLA-DMAP28067 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DMAP28067 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DMAP28067 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.79□□□□□ -0.2
HLA-DMAP28067 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HLA-DMAP28067 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
HLA-DMAP28067 AL356585.2-201ENST00000625078 2396 ntBASIC13.79□□□□□ -0.2
HLA-DMAP28067 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DMAP28067 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DMAP28067 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DMAP28067 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DMAP28067 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DMAP28067 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DMAP28067 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DMAP28067 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DMAP28067 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DMAP28067 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DMAP28067 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DMAP28067 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.79□□□□□ -0.2
HLA-DMAP28067 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.79□□□□□ -0.2
HLA-DMAP28067 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DMAP28067 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.79□□□□□ -0.2
HLA-DMAP28067 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DMAP28067 MIR5100-201ENST00000579544 119 ntBASIC13.79□□□□□ -0.2
HLA-DMAP28067 AP002414.4-201ENST00000589764 1148 ntBASIC13.79□□□□□ -0.2
HLA-DMAP28067 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
HLA-DMAP28067 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DMAP28067 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DMAP28067 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.79□□□□□ -0.2
HLA-DMAP28067 AP005117.1-201ENST00000584346 1413 ntBASIC13.79□□□□□ -0.2
HLA-DMAP28067 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HLA-DMAP28067 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
HLA-DMAP28067 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
HLA-DMAP28067 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.79□□□□□ -0.2
HLA-DMAP28067 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HLA-DMAP28067 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
HLA-DMAP28067 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DMAP28067 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DMAP28067 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms