Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP24386 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHMP24386 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
CHMP24386 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CHMP24386 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CHMP24386 TMBIM7P-203ENST00000641617 1718 ntBASIC14.89□□□□□ -0.03
CHMP24386 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.89□□□□□ -0.03
CHMP24386 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.89□□□□□ -0.03
CHMP24386 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.89□□□□□ -0.03
CHMP24386 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.89□□□□□ -0.03
CHMP24386 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.89□□□□□ -0.03
CHMP24386 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.89□□□□□ -0.03
CHMP24386 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.89□□□□□ -0.03
CHMP24386 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.89□□□□□ -0.03
CHMP24386 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.89□□□□□ -0.03
CHMP24386 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CHMP24386 AC027796.2-201ENST00000575326 344 ntBASIC14.89□□□□□ -0.03
CHMP24386 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.89□□□□□ -0.03
CHMP24386 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.89□□□□□ -0.03
CHMP24386 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.89□□□□□ -0.03
CHMP24386 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CHMP24386 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CHMP24386 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHMP24386 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHMP24386 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHMP24386 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CHMP24386 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CHMP24386 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHMP24386 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHMP24386 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHMP24386 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHMP24386 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHMP24386 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHMP24386 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.88□□□□□ -0.03
CHMP24386 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHMP24386 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
CHMP24386 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHMP24386 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.88□□□□□ -0.03
CHMP24386 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHMP24386 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHMP24386 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHMP24386 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CHMP24386 AL139400.1-201ENST00000366220 510 ntBASIC14.88□□□□□ -0.03
CHMP24386 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CHMP24386 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.88□□□□□ -0.03
CHMP24386 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.88□□□□□ -0.03
CHMP24386 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CHMP24386 FAM58DP-201ENST00000428076 619 ntBASIC14.88□□□□□ -0.03
CHMP24386 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.88□□□□□ -0.03
CHMP24386 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.88□□□□□ -0.03
CHMP24386 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.88□□□□□ -0.03
CHMP24386 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.88□□□□□ -0.03
CHMP24386 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.88□□□□□ -0.03
CHMP24386 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHMP24386 AL109954.1-202ENST00000564051 2148 ntBASIC14.88□□□□□ -0.03
CHMP24386 AL138918.1-201ENST00000568306 659 ntBASIC14.88□□□□□ -0.03
CHMP24386 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.88□□□□□ -0.03
CHMP24386 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.88□□□□□ -0.03
CHMP24386 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CHMP24386 LINC00628-201ENST00000628516 1289 ntBASIC14.88□□□□□ -0.03
CHMP24386 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.88□□□□□ -0.03
CHMP24386 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.88□□□□□ -0.03
CHMP24386 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHMP24386 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
CHMP24386 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.88□□□□□ -0.03
CHMP24386 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHMP24386 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHMP24386 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
CHMP24386 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms