Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL1P22362 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CCL1P22362 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CCL1P22362 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL1P22362 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.63□□□□□ -0.23
CCL1P22362 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL1P22362 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CCL1P22362 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL1P22362 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
CCL1P22362 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL1P22362 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL1P22362 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL1P22362 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL1P22362 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL1P22362 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CCL1P22362 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.63□□□□□ -0.23
CCL1P22362 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL1P22362 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL1P22362 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CCL1P22362 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.63□□□□□ -0.23
CCL1P22362 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL1P22362 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CCL1P22362 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL1P22362 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.63□□□□□ -0.23
CCL1P22362 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL1P22362 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.63□□□□□ -0.23
CCL1P22362 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL1P22362 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL1P22362 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL1P22362 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CCL1P22362 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL1P22362 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
CCL1P22362 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.63□□□□□ -0.23
CCL1P22362 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.63□□□□□ -0.23
CCL1P22362 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL1P22362 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL1P22362 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL1P22362 AC023024.2-201ENST00000623561 1993 ntBASIC13.63□□□□□ -0.23
CCL1P22362 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL1P22362 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL1P22362 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL1P22362 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL1P22362 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.63□□□□□ -0.23
CCL1P22362 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL1P22362 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL1P22362 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL1P22362 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.63□□□□□ -0.23
CCL1P22362 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL1P22362 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL1P22362 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
CCL1P22362 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL1P22362 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.62□□□□□ -0.23
CCL1P22362 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.62□□□□□ -0.23
CCL1P22362 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
CCL1P22362 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCL1P22362 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CCL1P22362 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.62□□□□□ -0.23
CCL1P22362 AL022342.1-201ENST00000400363 863 ntBASIC13.62□□□□□ -0.23
CCL1P22362 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CCL1P22362 AL627223.1-201ENST00000416693 442 ntBASIC13.62□□□□□ -0.23
CCL1P22362 KRT18P32-201ENST00000424695 1287 ntBASIC13.62□□□□□ -0.23
CCL1P22362 FAM58DP-201ENST00000428076 619 ntBASIC13.62□□□□□ -0.23
CCL1P22362 AC005237.2-201ENST00000434368 219 ntBASIC13.62□□□□□ -0.23
CCL1P22362 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.62□□□□□ -0.23
CCL1P22362 CEND1P1-201ENST00000451006 455 ntBASIC13.62□□□□□ -0.23
CCL1P22362 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL1P22362 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.62□□□□□ -0.23
CCL1P22362 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.62□□□□□ -0.23
CCL1P22362 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.62□□□□□ -0.23
CCL1P22362 AC005829.1-201ENST00000570002 483 ntBASIC13.62□□□□□ -0.23
CCL1P22362 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.62□□□□□ -0.23
CCL1P22362 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL1P22362 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.62□□□□□ -0.23
CCL1P22362 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms