Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GAP43P17677 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.44■□□□□ 0.38
GAP43P17677 RPL13P2-201ENST00000440687 659 ntBASIC17.44■□□□□ 0.38
GAP43P17677 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
GAP43P17677 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.44■□□□□ 0.38
GAP43P17677 AC009477.1-201ENST00000452936 217 ntBASIC17.44■□□□□ 0.38
GAP43P17677 AC044860.1-202ENST00000559481 777 ntBASIC17.44■□□□□ 0.38
GAP43P17677 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
GAP43P17677 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.44■□□□□ 0.38
GAP43P17677 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.44■□□□□ 0.38
GAP43P17677 AL109936.8-201ENST00000641772 604 ntBASIC17.44■□□□□ 0.38
GAP43P17677 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
GAP43P17677 AC090616.6-203ENST00000579186 1945 ntBASIC17.44■□□□□ 0.38
GAP43P17677 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GAP43P17677 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
GAP43P17677 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.44■□□□□ 0.38
GAP43P17677 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GAP43P17677 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GAP43P17677 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
GAP43P17677 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GAP43P17677 TMBIM7P-203ENST00000641617 1718 ntBASIC17.44■□□□□ 0.38
GAP43P17677 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GAP43P17677 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GAP43P17677 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.44■□□□□ 0.38
GAP43P17677 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
GAP43P17677 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
GAP43P17677 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.43■□□□□ 0.38
GAP43P17677 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
GAP43P17677 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.43■□□□□ 0.38
GAP43P17677 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
GAP43P17677 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.43■□□□□ 0.38
GAP43P17677 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.43■□□□□ 0.38
GAP43P17677 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.43■□□□□ 0.38
GAP43P17677 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.43■□□□□ 0.38
GAP43P17677 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.43■□□□□ 0.38
GAP43P17677 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.43■□□□□ 0.38
GAP43P17677 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
GAP43P17677 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.43■□□□□ 0.38
GAP43P17677 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.43■□□□□ 0.38
GAP43P17677 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.43■□□□□ 0.38
GAP43P17677 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.43■□□□□ 0.38
GAP43P17677 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.43■□□□□ 0.38
GAP43P17677 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.43■□□□□ 0.38
GAP43P17677 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.43■□□□□ 0.38
GAP43P17677 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
GAP43P17677 AL390955.2-201ENST00000603032 514 ntBASIC17.43■□□□□ 0.38
GAP43P17677 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.43■□□□□ 0.38
GAP43P17677 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.43■□□□□ 0.38
GAP43P17677 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 AC087481.3-201ENST00000602886 1894 ntBASIC17.43■□□□□ 0.38
GAP43P17677 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.43■□□□□ 0.38
GAP43P17677 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.43■□□□□ 0.38
GAP43P17677 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.43■□□□□ 0.38
GAP43P17677 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.43■□□□□ 0.38
GAP43P17677 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GAP43P17677 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GAP43P17677 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GAP43P17677 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GAP43P17677 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GAP43P17677 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
GAP43P17677 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.42■□□□□ 0.38
GAP43P17677 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GAP43P17677 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GAP43P17677 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.42■□□□□ 0.38
GAP43P17677 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.42■□□□□ 0.38
GAP43P17677 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.42■□□□□ 0.38
GAP43P17677 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
GAP43P17677 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.42■□□□□ 0.38
GAP43P17677 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GAP43P17677 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GAP43P17677 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
GAP43P17677 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GAP43P17677 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
GAP43P17677 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GAP43P17677 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.42■□□□□ 0.38
GAP43P17677 BASP1P1-201ENST00000430708 665 ntBASIC17.42■□□□□ 0.38
GAP43P17677 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms