Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL109936.8-201ENST00000641772 604 ntBASIC16.06■□□□□ 0.16
HLA-DQB2P05538 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQB2P05538 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.06■□□□□ 0.16
HLA-DQB2P05538 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.06■□□□□ 0.16
HLA-DQB2P05538 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQB2P05538 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQB2P05538 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQB2P05538 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
HLA-DQB2P05538 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
HLA-DQB2P05538 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.06■□□□□ 0.16
HLA-DQB2P05538 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQB2P05538 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.06■□□□□ 0.16
HLA-DQB2P05538 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQB2P05538 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQB2P05538 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.06■□□□□ 0.16
HLA-DQB2P05538 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQB2P05538 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HLA-DQB2P05538 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 AC044860.1-202ENST00000559481 777 ntBASIC16.05■□□□□ 0.16
HLA-DQB2P05538 AC005498.2-205ENST00000593218 784 ntBASIC16.05■□□□□ 0.16
HLA-DQB2P05538 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 PPT1-215ENST00000641471 2368 ntBASIC16.05■□□□□ 0.16
HLA-DQB2P05538 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQB2P05538 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 AC073347.1-201ENST00000421633 2643 ntBASIC16.04■□□□□ 0.16
HLA-DQB2P05538 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 AC092384.3-202ENST00000564646 2873 ntBASIC16.04■□□□□ 0.16
HLA-DQB2P05538 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 KRT18P64-201ENST00000434946 1219 ntBASIC16.04■□□□□ 0.16
HLA-DQB2P05538 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 CYMP-203ENST00000474680 1263 ntBASIC16.04■□□□□ 0.16
HLA-DQB2P05538 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.04■□□□□ 0.16
HLA-DQB2P05538 LINC01115-203ENST00000606068 577 ntBASIC16.04■□□□□ 0.16
HLA-DQB2P05538 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms