Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHGBP05060 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.96■□□□□ 0.63
CHGBP05060 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.96■□□□□ 0.63
CHGBP05060 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHGBP05060 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.95■□□□□ 0.62
CHGBP05060 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.95■□□□□ 0.62
CHGBP05060 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHGBP05060 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHGBP05060 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.95■□□□□ 0.62
CHGBP05060 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHGBP05060 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.95■□□□□ 0.62
CHGBP05060 COX20P2-201ENST00000452636 358 ntBASIC18.95■□□□□ 0.62
CHGBP05060 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.95■□□□□ 0.62
CHGBP05060 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.95■□□□□ 0.62
CHGBP05060 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.95■□□□□ 0.62
CHGBP05060 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.95■□□□□ 0.62
CHGBP05060 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.95■□□□□ 0.62
CHGBP05060 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.95■□□□□ 0.62
CHGBP05060 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHGBP05060 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.95■□□□□ 0.62
CHGBP05060 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.95■□□□□ 0.62
CHGBP05060 AC090616.6-203ENST00000579186 1945 ntBASIC18.95■□□□□ 0.62
CHGBP05060 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHGBP05060 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHGBP05060 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHGBP05060 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHGBP05060 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CHGBP05060 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.95■□□□□ 0.62
CHGBP05060 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHGBP05060 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHGBP05060 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHGBP05060 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.95■□□□□ 0.62
CHGBP05060 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHGBP05060 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHGBP05060 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHGBP05060 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHGBP05060 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHGBP05060 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHGBP05060 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHGBP05060 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.94■□□□□ 0.62
CHGBP05060 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHGBP05060 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.94■□□□□ 0.62
CHGBP05060 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHGBP05060 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CHGBP05060 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
CHGBP05060 TOMM22P5-201ENST00000416399 439 ntBASIC18.94■□□□□ 0.62
CHGBP05060 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHGBP05060 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.94■□□□□ 0.62
CHGBP05060 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.94■□□□□ 0.62
CHGBP05060 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.94■□□□□ 0.62
CHGBP05060 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
CHGBP05060 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHGBP05060 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.94■□□□□ 0.62
CHGBP05060 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHGBP05060 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHGBP05060 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHGBP05060 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHGBP05060 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CHGBP05060 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CHGBP05060 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHGBP05060 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHGBP05060 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.94■□□□□ 0.62
CHGBP05060 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHGBP05060 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.94■□□□□ 0.62
CHGBP05060 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHGBP05060 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHGBP05060 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.94■□□□□ 0.62
CHGBP05060 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CHGBP05060 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHGBP05060 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHGBP05060 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
CHGBP05060 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHGBP05060 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHGBP05060 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CHGBP05060 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.93■□□□□ 0.62
CHGBP05060 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.93■□□□□ 0.62
CHGBP05060 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHGBP05060 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CHGBP05060 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHGBP05060 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHGBP05060 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CHGBP05060 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.93■□□□□ 0.62
CHGBP05060 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHGBP05060 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.93■□□□□ 0.62
CHGBP05060 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHGBP05060 TIMM17BP1-201ENST00000545713 516 ntBASIC18.93■□□□□ 0.62
CHGBP05060 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHGBP05060 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.93■□□□□ 0.62
CHGBP05060 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHGBP05060 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHGBP05060 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.93■□□□□ 0.62
CHGBP05060 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CHGBP05060 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHGBP05060 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHGBP05060 AC007431.3-201ENST00000623221 587 ntBASIC18.93■□□□□ 0.62
CHGBP05060 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHGBP05060 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CHGBP05060 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.93■□□□□ 0.62
CHGBP05060 AL121723.1-201ENST00000445194 1519 ntBASIC18.93■□□□□ 0.62
CHGBP05060 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms