Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
APOC1P02654 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
APOC1P02654 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.11□□□□□ -0.15
APOC1P02654 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.11□□□□□ -0.15
APOC1P02654 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.11□□□□□ -0.15
APOC1P02654 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
APOC1P02654 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.11□□□□□ -0.15
APOC1P02654 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.11□□□□□ -0.15
APOC1P02654 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.11□□□□□ -0.15
APOC1P02654 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 AL671277.1-201ENST00000429656 993 ntBASIC14.11□□□□□ -0.15
APOC1P02654 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.11□□□□□ -0.15
APOC1P02654 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.11□□□□□ -0.15
APOC1P02654 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.11□□□□□ -0.15
APOC1P02654 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.11□□□□□ -0.15
APOC1P02654 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.11□□□□□ -0.15
APOC1P02654 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.11□□□□□ -0.15
APOC1P02654 AC243562.2-201ENST00000561247 970 ntBASIC14.11□□□□□ -0.15
APOC1P02654 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.11□□□□□ -0.15
APOC1P02654 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.11□□□□□ -0.15
APOC1P02654 AC140113.2-201ENST00000604370 208 ntBASIC14.11□□□□□ -0.15
APOC1P02654 SPTSSB-204ENST00000617024 1292 ntBASIC14.11□□□□□ -0.15
APOC1P02654 AC008267.7-201ENST00000624570 1194 ntBASIC14.11□□□□□ -0.15
APOC1P02654 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
APOC1P02654 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
APOC1P02654 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 AC138035.3-201ENST00000622706 2791 ntBASIC14.11□□□□□ -0.15
APOC1P02654 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
APOC1P02654 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.1□□□□□ -0.15
APOC1P02654 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC1P02654 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
APOC1P02654 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOC1P02654 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC1P02654 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.1□□□□□ -0.15
APOC1P02654 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
APOC1P02654 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOC1P02654 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.1□□□□□ -0.15
APOC1P02654 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC1P02654 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
APOC1P02654 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.1□□□□□ -0.15
APOC1P02654 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
APOC1P02654 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
APOC1P02654 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.1□□□□□ -0.15
APOC1P02654 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC1P02654 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
APOC1P02654 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC1P02654 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.1□□□□□ -0.15
APOC1P02654 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
APOC1P02654 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
APOC1P02654 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.1□□□□□ -0.15
APOC1P02654 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.1□□□□□ -0.15
APOC1P02654 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC1P02654 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOC1P02654 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOC1P02654 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.1□□□□□ -0.15
APOC1P02654 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOC1P02654 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.1□□□□□ -0.15
APOC1P02654 AC040169.1-201ENST00000565382 521 ntBASIC14.1□□□□□ -0.15
APOC1P02654 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC1P02654 AL513190.1-201ENST00000621254 727 ntBASIC14.1□□□□□ -0.15
APOC1P02654 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
APOC1P02654 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
APOC1P02654 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.1□□□□□ -0.15
APOC1P02654 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.1□□□□□ -0.15
APOC1P02654 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.1□□□□□ -0.15
APOC1P02654 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.1□□□□□ -0.15
APOC1P02654 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC1P02654 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC1P02654 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
APOC1P02654 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC1P02654 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
APOC1P02654 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC1P02654 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOC1P02654 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC1P02654 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC1P02654 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.1□□□□□ -0.15
APOC1P02654 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms