Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF13O43567 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RNF13O43567 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF13O43567 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.51□□□□□ -0.09
RNF13O43567 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.51□□□□□ -0.09
RNF13O43567 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF13O43567 RNA5SP410-201ENST00000516285 106 ntBASIC14.51□□□□□ -0.09
RNF13O43567 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
RNF13O43567 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.51□□□□□ -0.09
RNF13O43567 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF13O43567 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RNF13O43567 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.51□□□□□ -0.09
RNF13O43567 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.51□□□□□ -0.09
RNF13O43567 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
RNF13O43567 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.51□□□□□ -0.09
RNF13O43567 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
RNF13O43567 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF13O43567 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RNF13O43567 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF13O43567 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.51□□□□□ -0.09
RNF13O43567 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF13O43567 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF13O43567 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF13O43567 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF13O43567 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RNF13O43567 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF13O43567 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.51□□□□□ -0.09
RNF13O43567 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF13O43567 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF13O43567 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RNF13O43567 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF13O43567 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF13O43567 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RNF13O43567 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF13O43567 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF13O43567 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.5□□□□□ -0.09
RNF13O43567 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RNF13O43567 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.5□□□□□ -0.09
RNF13O43567 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.5□□□□□ -0.09
RNF13O43567 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.5□□□□□ -0.09
RNF13O43567 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RNF13O43567 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
RNF13O43567 AL109954.1-202ENST00000564051 2148 ntBASIC14.5□□□□□ -0.09
RNF13O43567 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RNF13O43567 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.5□□□□□ -0.09
RNF13O43567 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.5□□□□□ -0.09
RNF13O43567 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RNF13O43567 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.5□□□□□ -0.09
RNF13O43567 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.5□□□□□ -0.09
RNF13O43567 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.5□□□□□ -0.09
RNF13O43567 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.5□□□□□ -0.09
RNF13O43567 AC243562.1-201ENST00000560672 389 ntBASIC14.5□□□□□ -0.09
RNF13O43567 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.5□□□□□ -0.09
RNF13O43567 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.5□□□□□ -0.09
RNF13O43567 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.5□□□□□ -0.09
RNF13O43567 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RNF13O43567 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 AP001282.1-201ENST00000531301 1499 ntBASIC14.5□□□□□ -0.09
RNF13O43567 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RNF13O43567 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RNF13O43567 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.5□□□□□ -0.09
RNF13O43567 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
RNF13O43567 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.5□□□□□ -0.09
RNF13O43567 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF13O43567 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF13O43567 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RNF13O43567 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RNF13O43567 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF13O43567 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF13O43567 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF13O43567 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF13O43567 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.49□□□□□ -0.09
RNF13O43567 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms