Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH17O14917 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH17O14917 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH17O14917 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH17O14917 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH17O14917 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
PCDH17O14917 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
PCDH17O14917 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH17O14917 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH17O14917 AC013268.4-201ENST00000637413 2228 ntBASIC15.19■□□□□ 0.02
PCDH17O14917 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PCDH17O14917 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH17O14917 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH17O14917 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PCDH17O14917 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH17O14917 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH17O14917 AC236430.1-201ENST00000402231 743 ntBASIC15.19■□□□□ 0.02
PCDH17O14917 AC015922.1-201ENST00000421102 1152 ntBASIC15.19■□□□□ 0.02
PCDH17O14917 AC002472.2-201ENST00000442739 958 ntBASIC15.19■□□□□ 0.02
PCDH17O14917 TSPY16P-201ENST00000449843 468 ntBASIC15.19■□□□□ 0.02
PCDH17O14917 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDH17O14917 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PCDH17O14917 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH17O14917 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDH17O14917 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.19■□□□□ 0.02
PCDH17O14917 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.19■□□□□ 0.02
PCDH17O14917 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH17O14917 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDH17O14917 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
PCDH17O14917 AL138828.2-201ENST00000615812 383 ntBASIC15.19■□□□□ 0.02
PCDH17O14917 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
PCDH17O14917 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH17O14917 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH17O14917 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDH17O14917 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH17O14917 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH17O14917 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDH17O14917 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH17O14917 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
PCDH17O14917 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PCDH17O14917 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH17O14917 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PCDH17O14917 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH17O14917 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH17O14917 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH17O14917 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH17O14917 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PCDH17O14917 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
PCDH17O14917 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDH17O14917 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDH17O14917 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PCDH17O14917 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PCDH17O14917 AC069224.1-201ENST00000566372 1715 ntBASIC15.18■□□□□ 0.02
PCDH17O14917 AC005622.1-201ENST00000636801 1703 ntBASIC15.18■□□□□ 0.02
PCDH17O14917 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PCDH17O14917 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
PCDH17O14917 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDH17O14917 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDH17O14917 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 SPDYE17-201ENST00000412399 783 ntBASIC15.18■□□□□ 0.02
PCDH17O14917 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.18■□□□□ 0.02
PCDH17O14917 MTND6P24-201ENST00000440466 518 ntBASIC15.18■□□□□ 0.02
PCDH17O14917 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDH17O14917 AC004890.2-204ENST00000481968 304 ntBASIC15.18■□□□□ 0.02
PCDH17O14917 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.18■□□□□ 0.02
PCDH17O14917 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDH17O14917 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 AL079307.3-201ENST00000556114 283 ntBASIC15.18■□□□□ 0.02
PCDH17O14917 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDH17O14917 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDH17O14917 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDH17O14917 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.18■□□□□ 0.02
PCDH17O14917 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDH17O14917 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDH17O14917 BTBD7P1-201ENST00000447253 1453 ntBASIC15.18■□□□□ 0.02
PCDH17O14917 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDH17O14917 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDH17O14917 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH17O14917 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms