Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PIK3C2AO00443 ILF3-AS1-201ENST00000591501 1983 ntBASIC20.78■□□□□ 0.92
PIK3C2AO00443 BLK-205ENST00000529894 2017 ntTSL 5 BASIC20.78■□□□□ 0.92
PIK3C2AO00443 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC20.78■□□□□ 0.92
PIK3C2AO00443 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PIK3C2AO00443 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PIK3C2AO00443 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PIK3C2AO00443 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PIK3C2AO00443 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PIK3C2AO00443 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PIK3C2AO00443 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PIK3C2AO00443 AC016700.1-201ENST00000429424 312 ntBASIC20.77■□□□□ 0.92
PIK3C2AO00443 HLA-DPB2-205ENST00000435074 1188 ntBASIC20.77■□□□□ 0.92
PIK3C2AO00443 SERPINA13P-202ENST00000478994 924 ntBASIC20.77■□□□□ 0.92
PIK3C2AO00443 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC20.77■□□□□ 0.92
PIK3C2AO00443 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC20.77■□□□□ 0.92
PIK3C2AO00443 MIR4783-201ENST00000580343 82 ntBASIC20.77■□□□□ 0.92
PIK3C2AO00443 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PIK3C2AO00443 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PIK3C2AO00443 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.77■□□□□ 0.92
PIK3C2AO00443 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PIK3C2AO00443 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PIK3C2AO00443 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
PIK3C2AO00443 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.77■□□□□ 0.92
PIK3C2AO00443 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.77■□□□□ 0.92
PIK3C2AO00443 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PIK3C2AO00443 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PIK3C2AO00443 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.77■□□□□ 0.91
PIK3C2AO00443 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PIK3C2AO00443 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC20.77■□□□□ 0.91
PIK3C2AO00443 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
PIK3C2AO00443 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC20.77■□□□□ 0.91
PIK3C2AO00443 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PIK3C2AO00443 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PIK3C2AO00443 COX5BP1-201ENST00000507622 393 ntBASIC20.77■□□□□ 0.91
PIK3C2AO00443 NDUFV2P1-201ENST00000596415 907 ntBASIC20.77■□□□□ 0.91
PIK3C2AO00443 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
PIK3C2AO00443 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PIK3C2AO00443 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PIK3C2AO00443 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC20.76■□□□□ 0.91
PIK3C2AO00443 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.76■□□□□ 0.91
PIK3C2AO00443 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PIK3C2AO00443 AL603832.2-201ENST00000566195 2125 ntBASIC20.76■□□□□ 0.91
PIK3C2AO00443 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PIK3C2AO00443 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PIK3C2AO00443 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.76■□□□□ 0.91
PIK3C2AO00443 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PIK3C2AO00443 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PIK3C2AO00443 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC20.76■□□□□ 0.91
PIK3C2AO00443 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC20.76■□□□□ 0.91
PIK3C2AO00443 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PIK3C2AO00443 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC20.76■□□□□ 0.91
PIK3C2AO00443 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC20.76■□□□□ 0.91
PIK3C2AO00443 AC005077.2-201ENST00000449786 690 ntBASIC20.76■□□□□ 0.91
PIK3C2AO00443 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC20.76■□□□□ 0.91
PIK3C2AO00443 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC20.76■□□□□ 0.91
PIK3C2AO00443 NKG7-204ENST00000595217 816 ntTSL 2 BASIC20.76■□□□□ 0.91
PIK3C2AO00443 AC097724.1-201ENST00000609581 426 ntBASIC20.76■□□□□ 0.91
PIK3C2AO00443 AC138649.2-201ENST00000615886 705 ntBASIC20.76■□□□□ 0.91
PIK3C2AO00443 AP001002.3-201ENST00000623482 206 ntBASIC20.76■□□□□ 0.91
PIK3C2AO00443 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PIK3C2AO00443 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PIK3C2AO00443 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.75■□□□□ 0.91
PIK3C2AO00443 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.75■□□□□ 0.91
PIK3C2AO00443 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PIK3C2AO00443 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PIK3C2AO00443 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PIK3C2AO00443 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PIK3C2AO00443 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.75■□□□□ 0.91
PIK3C2AO00443 SMS-201ENST00000379404 1174 ntTSL 3 BASIC20.75■□□□□ 0.91
PIK3C2AO00443 GHSR-202ENST00000427970 912 ntBASIC20.75■□□□□ 0.91
PIK3C2AO00443 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC20.75■□□□□ 0.91
PIK3C2AO00443 EIF4HP1-201ENST00000453115 687 ntBASIC20.75■□□□□ 0.91
PIK3C2AO00443 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC20.75■□□□□ 0.91
PIK3C2AO00443 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC20.75■□□□□ 0.91
PIK3C2AO00443 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC20.75■□□□□ 0.91
PIK3C2AO00443 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC20.75■□□□□ 0.91
PIK3C2AO00443 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC20.75■□□□□ 0.91
PIK3C2AO00443 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC20.75■□□□□ 0.91
PIK3C2AO00443 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC20.75■□□□□ 0.91
PIK3C2AO00443 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC20.75■□□□□ 0.91
PIK3C2AO00443 AC138627.1-207ENST00000641560 1006 ntBASIC20.75■□□□□ 0.91
PIK3C2AO00443 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PIK3C2AO00443 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC20.75■□□□□ 0.91
PIK3C2AO00443 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PIK3C2AO00443 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PIK3C2AO00443 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PIK3C2AO00443 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
PIK3C2AO00443 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC20.75■□□□□ 0.91
PIK3C2AO00443 PCDHA14-201ENST00000506751 2298 ntBASIC20.75■□□□□ 0.91
PIK3C2AO00443 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC20.75■□□□□ 0.91
PIK3C2AO00443 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PIK3C2AO00443 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PIK3C2AO00443 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PIK3C2AO00443 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC20.74■□□□□ 0.91
PIK3C2AO00443 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC20.74■□□□□ 0.91
PIK3C2AO00443 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PIK3C2AO00443 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC20.74■□□□□ 0.91
PIK3C2AO00443 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PIK3C2AO00443 AC022217.1-201ENST00000521069 738 ntBASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms